Strain Fitness in Shewanella oneidensis MR-1 around SO4701

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
4,902,125	+				+0.7
4,902,133	-				+0.6
4,902,133	-				+0.3
4,902,170	+				-1.2
4,902,197	-				+0.7
4,902,207	-				-0.1
4,902,274	+		SO4700	0.18	+0.0
4,902,293	+		SO4700	0.20	-0.4
4,902,293	+		SO4700	0.20	-0.5
4,902,301	-		SO4700	0.21	+0.4
4,902,301	-		SO4700	0.21	-0.5
4,902,315	+		SO4700	0.23	+0.3
4,902,403	-		SO4700	0.34	+0.1
4,902,403	-		SO4700	0.34	+1.3
4,902,404	+		SO4700	0.34	-0.2
4,902,427	+		SO4700	0.37	+0.2
4,902,427	+		SO4700	0.37	+0.1
4,902,435	-		SO4700	0.38	+0.8
4,902,435	-		SO4700	0.38	+0.1
4,902,462	+		SO4700	0.42	-0.4
4,902,481	+		SO4700	0.44	-0.1
4,902,562	+		SO4700	0.54	-1.0
4,902,562	+		SO4700	0.54	+0.2
4,902,562	+		SO4700	0.54	+0.2
4,902,570	-		SO4700	0.55	-0.0
4,902,570	-		SO4700	0.55	-0.6
4,902,598	-		SO4700	0.59	+0.0
4,902,643	+		SO4700	0.65	+0.3
4,902,652	-		SO4700	0.66	+0.9
4,902,662	-		SO4700	0.67	-0.5
4,902,781	-		SO4700	0.82	-1.0
4,902,782	-		SO4700	0.82	+0.4
4,902,822	+		SO4700	0.87	-0.1
4,902,822	+		SO4700	0.87	-0.3
4,902,822	+		SO4700	0.87	-0.2
4,902,822	+		SO4700	0.87	+0.3
4,902,822	+		SO4700	0.87	+0.4
4,902,830	-		SO4700	0.88	+0.2
4,902,830	-		SO4700	0.88	+1.1
4,902,830	-		SO4700	0.88	-0.2
4,902,832	+		SO4700	0.88	-0.9
4,902,832	+		SO4700	0.88	-1.7
4,902,832	+		SO4700	0.88	-1.0
4,902,840	-		SO4700	0.89	-0.2
4,902,857	+				+0.7
4,902,889	-				-0.9
4,902,889	-				-0.9
4,902,961	+				+0.1
4,903,008	+				+0.4
4,903,086	-		SO4701	0.13	+0.6
4,903,086	-		SO4701	0.13	-0.1
4,903,148	+		SO4701	0.24	-0.1
4,903,156	-		SO4701	0.26	-0.5
4,903,163	-		SO4701	0.27	-0.3
4,903,174	-		SO4701	0.29	+0.5
4,903,227	+		SO4701	0.39	-0.8
4,903,436	-		SO4701	0.78	-0.8
4,903,453	+		SO4701	0.81	-1.1
4,903,466	-		SO4701	0.84	+0.5
4,903,698	-				-0.4
4,903,739	-				-0.6
4,903,786	-				-1.2
4,903,787	-				-0.8
4,903,791	-				-2.0
4,903,805	-				-0.3
4,903,888	+	gor	SO4702	0.12	-1.4
4,903,927	-	gor	SO4702	0.15	-2.7
4,903,939	+	gor	SO4702	0.16	-1.0
4,903,955	+	gor	SO4702	0.17	-3.5
4,903,974	+	gor	SO4702	0.18	-2.9
4,903,982	-	gor	SO4702	0.19	-3.2
4,904,003	-	gor	SO4702	0.20	-1.1
4,904,027	-	gor	SO4702	0.22	-0.6
4,904,100	-	gor	SO4702	0.27	-3.8
4,904,100	-	gor	SO4702	0.27	-3.6
4,904,107	-	gor	SO4702	0.28	-2.0
4,904,111	+	gor	SO4702	0.28	-0.8
4,904,119	-	gor	SO4702	0.29	+0.3
4,904,125	+	gor	SO4702	0.29	-0.8
4,904,225	+	gor	SO4702	0.37	-2.0
4,904,225	+	gor	SO4702	0.37	-0.9
4,904,233	-	gor	SO4702	0.37	-0.1
4,904,233	-	gor	SO4702	0.37	-0.9
4,904,233	-	gor	SO4702	0.37	-0.3
4,904,261	-	gor	SO4702	0.39	-1.6
4,904,336	+	gor	SO4702	0.45	-1.5
4,904,349	-	gor	SO4702	0.46	-1.8
4,904,349	-	gor	SO4702	0.46	-0.8
4,904,392	+	gor	SO4702	0.49	-0.5
4,904,397	+	gor	SO4702	0.49	-1.0
4,904,400	-	gor	SO4702	0.50	-1.0
4,904,454	+	gor	SO4702	0.54	-1.8
4,904,454	+	gor	SO4702	0.54	-1.2
4,904,457	-	gor	SO4702	0.54	-1.0
4,904,462	-	gor	SO4702	0.54	-0.7