Strain Fitness in Shewanella oneidensis MR-1 around SO4507

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
4,698,427	-		SO4506	0.41	+1.0
4,698,493	-		SO4506	0.45	+1.1
4,698,529	+		SO4506	0.47	+1.3
4,698,529	+		SO4506	0.47	+1.6
4,698,529	+		SO4506	0.47	+2.3
4,698,529	+		SO4506	0.47	+1.0
4,698,529	+		SO4506	0.47	+2.1
4,698,645	+		SO4506	0.54	+1.6
4,698,670	+		SO4506	0.56	+1.5
4,698,670	+		SO4506	0.56	+0.9
4,698,670	+		SO4506	0.56	+1.4
4,698,678	-		SO4506	0.56	+0.7
4,698,678	-		SO4506	0.56	+1.0
4,698,678	-		SO4506	0.56	+0.9
4,698,695	+		SO4506	0.57	+1.5
4,698,702	+		SO4506	0.58	+0.8
4,698,854	-		SO4506	0.67	+4.5
4,698,854	-		SO4506	0.67	+0.2
4,698,901	+		SO4506	0.70	+1.5
4,698,901	+		SO4506	0.70	+1.7
4,699,116	+		SO4506	0.82	+1.6
4,699,134	-		SO4506	0.83	-0.5
4,699,166	-		SO4506	0.85	+1.7
4,699,266	+				+1.3
4,699,266	+				+0.2
4,699,288	+				+1.9
4,699,296	-				+1.5
4,699,460	+				+0.3
4,699,468	-				+0.4
4,699,507	+		SO4507	0.13	+0.2
4,699,580	+		SO4507	0.23	+1.4
4,699,618	+		SO4507	0.29	+1.4
4,699,705	-		SO4507	0.42	-0.1
4,699,814	+		SO4507	0.58	+0.9
4,699,814	+		SO4507	0.58	+1.1
4,699,831	+		SO4507	0.60	+1.6
4,700,041	+				+1.7
4,700,041	+				+1.1
4,700,048	+				+1.9
4,700,048	+				+1.0
4,700,250	-				+1.8
4,700,260	+				+1.0
4,700,298	-		SO4508	0.18	+1.4
4,700,300	+		SO4508	0.19	+0.7
4,700,300	+		SO4508	0.19	+0.6
4,700,300	+		SO4508	0.19	+1.2
4,700,308	-		SO4508	0.23	+2.2
4,700,377	+		SO4508	0.58	+0.7
4,700,385	-		SO4508	0.62	+1.3
4,700,390	-		SO4508	0.65	+1.5
4,700,458	+				+1.0
4,700,466	-				+2.0
4,700,480	+				+1.6
4,700,493	+				+1.9
4,700,493	+				+0.8
4,700,532	+				+1.1
4,700,599	-				+1.3
4,700,695	+				+0.7
4,700,695	+				+1.7
4,700,695	+				+1.6
4,700,696	-				+0.9
4,700,696	-				+1.6
4,700,697	+				+1.4
4,700,697	+				+1.1
4,700,697	+				+1.4
4,700,699	-				+1.9
4,700,738	+				+1.2
4,700,738	+				-0.8
4,700,746	-				+2.2
4,700,771	-		SO4509	0.10	+1.9
4,700,771	-		SO4509	0.10	-0.3
4,700,784	+		SO4509	0.11	+2.0
4,700,784	+		SO4509	0.11	+2.1
4,700,877	+		SO4509	0.14	+1.2
4,700,937	+		SO4509	0.16	+2.5
4,700,964	+		SO4509	0.17	+1.0
4,700,964	+		SO4509	0.17	+0.8
4,700,964	+		SO4509	0.17	+0.7
4,700,986	+		SO4509	0.18	+1.8
4,700,986	+		SO4509	0.18	+2.2
4,701,091	+		SO4509	0.22	+1.8
4,701,091	+		SO4509	0.22	+1.5
4,701,099	-		SO4509	0.22	+2.0