Strain Fitness in Shewanella oneidensis MR-1 around SO4365

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
4,559,507	-	recG	SO4364	0.61	-0.5
4,559,567	-	recG	SO4364	0.64	-2.4
4,559,693	-	recG	SO4364	0.70	+0.8
4,559,719	+	recG	SO4364	0.71	-1.6
4,559,727	-	recG	SO4364	0.71	-2.3
4,559,727	-	recG	SO4364	0.71	-2.5
4,559,727	-	recG	SO4364	0.71	-2.6
4,559,745	+	recG	SO4364	0.72	-1.8
4,559,805	-	recG	SO4364	0.75	-1.6
4,559,805	-	recG	SO4364	0.75	-1.6
4,559,845	-	recG	SO4364	0.77	-1.8
4,559,998	+	recG	SO4364	0.85	-0.7
4,560,013	+	recG	SO4364	0.85	+0.7
4,560,018	+	recG	SO4364	0.85	-1.1
4,560,018	+	recG	SO4364	0.85	-0.9
4,560,111	+				-2.0
4,560,119	-				-0.2
4,560,178	-				-1.8
4,560,291	-				-2.1
4,560,318	+				+0.1
4,560,326	-				+0.2
4,560,358	+				-0.5
4,560,375	+				-0.1
4,560,419	-				-0.7
4,560,468	+				-1.0
4,560,469	+				-0.3
4,560,591	-		SO4365	0.11	-0.6
4,560,591	-		SO4365	0.11	-1.3
4,560,591	-		SO4365	0.11	-0.1
4,560,601	+		SO4365	0.12	-0.4
4,560,755	-		SO4365	0.29	-0.1
4,560,770	+		SO4365	0.31	-0.8
4,560,786	-		SO4365	0.32	-1.2
4,560,858	-		SO4365	0.40	-0.4
4,560,909	-		SO4365	0.46	-1.0
4,560,953	-		SO4365	0.51	+0.3
4,560,981	-		SO4365	0.54	-0.3
4,561,094	+		SO4365	0.67	-0.3
4,561,094	+		SO4365	0.67	-1.1
4,561,094	+		SO4365	0.67	+0.4
4,561,102	-		SO4365	0.68	-1.9
4,561,106	+		SO4365	0.68	-1.9
4,561,106	+		SO4365	0.68	-0.6
4,561,106	+		SO4365	0.68	+0.2
4,561,106	+		SO4365	0.68	-0.7
4,561,106	+		SO4365	0.68	-0.8
4,561,132	+		SO4365	0.71	-1.2
4,561,132	+		SO4365	0.71	+0.4
4,561,132	+		SO4365	0.71	-0.8
4,561,142	+		SO4365	0.72	-0.6
4,561,150	-		SO4365	0.73	+0.4
4,561,150	-		SO4365	0.73	-0.1
4,561,150	-		SO4365	0.73	-2.1
4,561,152	+		SO4365	0.73	-0.8
4,561,152	+		SO4365	0.73	-0.6
4,561,153	+		SO4365	0.73	-0.6
4,561,161	-		SO4365	0.74	-0.6
4,561,288	+		SO4365	0.89	-1.3
4,561,296	-		SO4365	0.89	-0.9
4,561,296	-		SO4365	0.89	-1.8
4,561,332	-				-0.4
4,561,359	+				+0.3
4,561,459	+				+1.9
4,561,478	+				-1.8
4,561,492	+				+0.5
4,561,511	-				-0.5
4,561,616	-				+0.4
4,561,734	+				+0.8
4,561,742	-				+0.6
4,561,760	+				-0.9
4,561,791	-				+0.5
4,562,021	+		SO4366	0.35	-0.3
4,562,034	+		SO4366	0.37	-0.8
4,562,034	+		SO4366	0.37	-1.3
4,562,034	+		SO4366	0.37	-0.9
4,562,034	+		SO4366	0.37	-0.1
4,562,034	+		SO4366	0.37	+1.7
4,562,042	-		SO4366	0.38	-0.1
4,562,042	-		SO4366	0.38	-0.9
4,562,042	-		SO4366	0.38	-0.4
4,562,071	+		SO4366	0.42	-0.2
4,562,085	+		SO4366	0.44	+0.5
4,562,101	+		SO4366	0.46	-0.2
4,562,109	-		SO4366	0.47	-0.4
4,562,109	-		SO4366	0.47	-0.2
4,562,115	-		SO4366	0.48	+0.5
4,562,175	+		SO4366	0.56	-1.0
4,562,175	+		SO4366	0.56	-2.1
4,562,305	+		SO4366	0.74	+0.1
4,562,313	-		SO4366	0.75	-1.1
4,562,338	+		SO4366	0.78	+0.1