Strain Fitness in Shewanella oneidensis MR-1 around SO4305

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
4,481,937	-		SO4303	0.50	-3.6
4,482,035	+		SO4303	0.69	-0.4
4,482,038	-		SO4303	0.70	-1.3
4,482,145	-				-0.1
4,482,164	+				+0.7
4,482,172	-				+0.6
4,482,256	+		SO4304	0.11	+0.4
4,482,259	-		SO4304	0.11	+0.1
4,482,304	-		SO4304	0.19	-1.2
4,482,304	-		SO4304	0.19	-0.1
4,482,389	+		SO4304	0.34	+0.6
4,482,389	+		SO4304	0.34	+0.7
4,482,544	-		SO4304	0.61	+0.0
4,482,623	+		SO4304	0.74	+0.0
4,482,671	+		SO4304	0.83	+0.3
4,482,672	+		SO4304	0.83	+0.1
4,482,679	-		SO4304	0.84	+0.0
4,482,723	-				+0.9
4,482,838	+				+0.5
4,482,846	-				+0.1
4,482,861	+				+0.6
4,482,947	+				-3.0
4,482,947	+				-1.9
4,482,955	+				-3.4
4,482,955	-				-2.2
4,482,972	+		SO4305	0.11	-4.0
4,483,044	+		SO4305	0.20	-1.6
4,483,075	+		SO4305	0.25	-3.0
4,483,083	-		SO4305	0.26	-2.4
4,483,136	-		SO4305	0.33	-1.0
4,483,261	-		SO4305	0.50	-3.5
4,483,347	-		SO4305	0.62	-3.2
4,483,350	+		SO4305	0.63	-1.6
4,483,363	-		SO4305	0.65	-2.4
4,483,568	-				-1.3
4,483,600	+				-2.9
4,483,657	+				-0.8
4,483,666	-				-0.2
4,483,825	+	xerC	SO4306	0.23	-0.8
4,483,882	-	xerC	SO4306	0.29	-1.2
4,483,931	-	xerC	SO4306	0.35	-1.0
4,483,997	+	xerC	SO4306	0.42	-0.3
4,484,005	-	xerC	SO4306	0.43	-1.5
4,484,070	+	xerC	SO4306	0.50	-1.0
4,484,195	+	xerC	SO4306	0.64	+0.0
4,484,195	+	xerC	SO4306	0.64	-3.1
4,484,195	+	xerC	SO4306	0.64	-0.8
4,484,319	+	xerC	SO4306	0.78	-0.2
4,484,469	+				-2.7
4,484,500	-				-0.4
4,484,521	-				+0.8
4,484,521	-				-1.5
4,484,521	-				+0.1
4,484,521	-				+0.1
4,484,547	+				-1.8
4,484,581	-				-0.7