Strain Fitness in Shewanella oneidensis MR-1 around SO3907

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
4,053,671	-				-1.4
4,053,737	+				+0.2
4,053,779	+				-0.0
4,053,802	+		SO3906	0.12	+0.3
4,053,809	+		SO3906	0.13	+0.0
4,053,809	+		SO3906	0.13	-0.2
4,053,817	-		SO3906	0.14	+0.1
4,053,853	+		SO3906	0.17	+0.6
4,053,853	+		SO3906	0.17	+0.4
4,053,853	+		SO3906	0.17	-1.6
4,053,861	-		SO3906	0.18	+0.4
4,054,019	+		SO3906	0.34	-0.5
4,054,040	-		SO3906	0.37	-0.7
4,054,040	-		SO3906	0.37	+0.8
4,054,072	-		SO3906	0.40	-0.6
4,054,137	+		SO3906	0.47	-1.8
4,054,142	-		SO3906	0.47	-0.1
4,054,143	-		SO3906	0.47	+0.2
4,054,163	-		SO3906	0.49	+0.1
4,054,320	+		SO3906	0.65	-0.5
4,054,337	+		SO3906	0.67	+0.4
4,054,432	+		SO3906	0.77	-0.6
4,054,583	-				+1.3
4,054,587	+				+0.8
4,054,710	+				-0.4
4,054,779	+		SO3907	0.23	-0.3
4,054,839	+		SO3907	0.36	+0.1
4,054,848	-		SO3907	0.38	+0.1
4,054,878	-		SO3907	0.44	-0.0
4,054,949	-		SO3907	0.59	+0.3
4,055,029	-		SO3907	0.75	+0.1
4,055,046	-		SO3907	0.79	+1.1
4,055,055	+		SO3907	0.81	+0.5
4,055,063	-		SO3907	0.82	+1.4
4,055,089	+		SO3907	0.88	-1.1
4,055,097	-		SO3907	0.89	+0.3
4,055,097	-		SO3907	0.89	+0.4
4,055,135	+				+0.2
4,055,143	-				+0.6
4,055,195	-				+1.1
4,055,195	-				-0.2
4,055,207	+				-0.6
4,055,229	+				+1.9
4,055,328	+		SO3908	0.20	-0.3
4,055,499	+		SO3908	0.43	+0.0
4,055,522	+		SO3908	0.46	+0.5
4,055,522	+		SO3908	0.46	+0.5
4,055,527	+		SO3908	0.47	+1.0
4,055,605	+		SO3908	0.57	+0.8
4,055,625	-		SO3908	0.60	+0.9
4,055,732	+		SO3908	0.74	-0.1
4,055,733	-		SO3908	0.75	-0.5
4,055,739	+		SO3908	0.75	+1.3
4,055,839	-		SO3908	0.89	+1.1
4,055,869	+				+1.4
4,055,877	-				-0.0
4,055,877	-				-0.1
4,055,964	+				-0.1
4,055,977	-				-0.8
4,055,994	-				+0.2
4,056,044	+				+0.4