Strain Fitness in Shewanella oneidensis MR-1 around SO3801

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
3,955,064	-		SO3800	0.75	-0.7
3,955,092	+		SO3800	0.76	+0.1
3,955,097	+		SO3800	0.76	-0.9
3,955,110	-		SO3800	0.77	-0.3
3,955,173	-		SO3800	0.78	-0.8
3,955,181	+		SO3800	0.79	+0.3
3,955,252	-		SO3800	0.81	+0.3
3,955,260	+		SO3800	0.81	+0.5
3,955,268	-		SO3800	0.81	-0.4
3,955,308	-		SO3800	0.82	-0.4
3,955,345	-		SO3800	0.83	+1.3
3,955,381	-		SO3800	0.84	-0.9
3,955,471	-		SO3800	0.87	+0.5
3,955,471	-		SO3800	0.87	+1.4
3,955,532	+		SO3800	0.88	+1.2
3,955,546	-		SO3800	0.89	+0.5
3,955,553	-		SO3800	0.89	+0.2
3,955,558	+		SO3800	0.89	-0.4
3,955,581	+		SO3800	0.90	+0.1
3,955,691	+				-0.1
3,955,790	-				+0.2
3,955,797	-				+0.0
3,955,797	-				-0.7
3,955,797	-				+0.3
3,955,865	+				-0.2
3,955,896	+				-0.0
3,955,896	+				+0.4
3,955,922	-				-1.1
3,955,927	-				+0.3
3,956,024	+				-0.6
3,956,040	+				-0.2
3,956,074	+				-1.0
3,956,074	+				-0.6
3,956,082	-				-0.0
3,956,082	-				-0.3
3,956,082	-				-1.8
3,956,109	+				-1.3
3,956,109	+				+0.1
3,956,119	-				-0.3
3,956,134	+				+0.3
3,956,142	-		SO3801	0.10	-3.7
3,956,166	-		SO3801	0.13	-0.5
3,956,273	-		SO3801	0.27	-0.9
3,956,288	+		SO3801	0.29	-1.7
3,956,288	+		SO3801	0.29	-0.6
3,956,375	+		SO3801	0.40	-0.8
3,956,375	+		SO3801	0.40	-1.4
3,956,383	-		SO3801	0.42	-0.3
3,956,416	-		SO3801	0.46	-0.7
3,956,473	-		SO3801	0.53	-0.9
3,956,519	-		SO3801	0.59	-0.6
3,956,544	+		SO3801	0.62	-2.3
3,956,545	+		SO3801	0.63	-2.1
3,956,552	-		SO3801	0.63	+0.7
3,956,562	-		SO3801	0.65	-1.2
3,956,562	-		SO3801	0.65	-0.8
3,956,589	-		SO3801	0.68	-0.8
3,956,658	+		SO3801	0.77	-0.1
3,956,734	-		SO3801	0.87	-2.9
3,956,760	+				-0.6
3,956,843	-				-0.4
3,956,955	+		SO3802	0.13	-1.8
3,956,987	-		SO3802	0.17	-1.1
3,956,987	-		SO3802	0.17	-1.9
3,957,007	-		SO3802	0.19	-2.0
3,957,007	-		SO3802	0.19	-0.3
3,957,249	+		SO3802	0.45	-0.2
3,957,252	-		SO3802	0.45	+0.2
3,957,317	-		SO3802	0.52	-1.4
3,957,344	+		SO3802	0.55	-0.7
3,957,361	-		SO3802	0.57	-0.5
3,957,413	+		SO3802	0.62	-1.4
3,957,413	+		SO3802	0.62	-2.6
3,957,487	-		SO3802	0.70	-0.9
3,957,652	-		SO3802	0.88	-0.0
3,957,678	+				-0.7
3,957,686	-				-0.5
3,957,828	-				-0.9