Strain Fitness in Shewanella oneidensis MR-1 around SO3468

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
3,612,508	-	ribBA	SO3467	0.15	+1.0
3,612,590	+	ribBA	SO3467	0.23	+1.8
3,612,590	+	ribBA	SO3467	0.23	+1.8
3,612,675	-	ribBA	SO3467	0.31	+1.0
3,612,733	-	ribBA	SO3467	0.36	+1.2
3,612,760	+	ribBA	SO3467	0.38	+1.4
3,612,760	+	ribBA	SO3467	0.38	+0.1
3,612,768	-	ribBA	SO3467	0.39	+0.6
3,612,768	-	ribBA	SO3467	0.39	-0.9
3,612,923	+	ribBA	SO3467	0.53	+0.9
3,612,970	+	ribBA	SO3467	0.57	+1.7
3,612,970	+	ribBA	SO3467	0.57	+1.4
3,612,978	-	ribBA	SO3467	0.58	+1.1
3,612,979	+	ribBA	SO3467	0.58	+1.7
3,612,987	-	ribBA	SO3467	0.59	+1.9
3,612,989	+	ribBA	SO3467	0.59	+0.7
3,612,989	+	ribBA	SO3467	0.59	+1.5
3,613,018	-	ribBA	SO3467	0.62	+2.0
3,613,018	-	ribBA	SO3467	0.62	+0.9
3,613,025	+	ribBA	SO3467	0.62	+0.7
3,613,025	+	ribBA	SO3467	0.62	-0.7
3,613,033	-	ribBA	SO3467	0.63	+0.9
3,613,061	+	ribBA	SO3467	0.65	+1.7
3,613,415	+				+3.0
3,613,420	+				+0.3
3,613,420	+				+1.6
3,613,420	+				+1.2
3,613,420	+				+1.4
3,613,420	+				+1.8
3,613,420	+				+0.9
3,613,428	-				+2.4
3,613,428	-				+0.3
3,613,428	-				+0.7
3,613,428	-				+1.4
3,613,428	-				+0.8
3,613,428	-				+1.9
3,613,428	-				+0.9
3,613,428	-				+0.7
3,613,428	-				+0.2
3,613,433	-				+2.0
3,613,438	-				+1.4
3,613,484	-				+0.6
3,613,503	+				+1.2
3,613,513	-				+0.8
3,613,671	+	ribE-2	SO3468	0.25	+0.8
3,613,775	+	ribE-2	SO3468	0.41	+1.9
3,613,834	+	ribE-2	SO3468	0.50	+1.0
3,613,878	-	ribE-2	SO3468	0.56	+1.6
3,613,878	-	ribE-2	SO3468	0.56	+0.5
3,613,878	-	ribE-2	SO3468	0.56	+1.8
3,613,878	-	ribE-2	SO3468	0.56	+0.9
3,614,003	+	ribE-2	SO3468	0.75	+1.7
3,614,020	+	ribE-2	SO3468	0.78	+1.9
3,614,028	-	ribE-2	SO3468	0.79	+1.5
3,614,129	-				+1.9