Strain Fitness in Shewanella oneidensis MR-1 around SO3212

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
3,350,845	+				+1.6
3,350,853	-				+1.4
3,350,853	-				+1.1
3,350,853	-				+0.3
3,351,311	-	flhG	SO3211	0.53	-4.5
3,351,457	-	flhG	SO3211	0.70	-4.0
3,351,511	-	flhG	SO3211	0.76	-3.2
3,351,571	-	flhG	SO3211	0.83	-5.2
3,351,591	+	flhG	SO3211	0.86	-0.2
3,351,638	+				-2.0
3,351,646	-				-5.2
3,351,770	-				-0.3
3,351,770	-				-1.7
3,351,982	-	flhF	SO3212	0.17	-3.1
3,352,025	-	flhF	SO3212	0.20	-0.2
3,352,032	+	flhF	SO3212	0.21	-3.5
3,352,045	-	flhF	SO3212	0.22	-2.4
3,352,109	+	flhF	SO3212	0.26	-3.3
3,352,260	+	flhF	SO3212	0.37	-1.2
3,352,310	-	flhF	SO3212	0.41	-0.5
3,352,383	+	flhF	SO3212	0.46	-3.3
3,352,621	-	flhF	SO3212	0.63	-2.2
3,352,690	+	flhF	SO3212	0.68	-2.8
3,352,743	-	flhF	SO3212	0.72	-1.4
3,352,896	+	flhF	SO3212	0.83	-3.0
3,353,048	+				-1.8
3,353,056	-				-2.5
3,353,143	-				-3.3
3,353,234	+				-5.0
3,353,262	-				-0.3
3,353,506	+	flhA	SO3213	0.18	+1.6
3,353,689	-	flhA	SO3213	0.26	+0.3
3,353,788	+	flhA	SO3213	0.31	+1.1
3,353,795	+	flhA	SO3213	0.31	+1.3
3,353,906	-	flhA	SO3213	0.37	+1.2
3,353,986	+	flhA	SO3213	0.41	+1.8
3,354,057	+	flhA	SO3213	0.44	+1.6
3,354,057	+	flhA	SO3213	0.44	+0.9
3,354,065	-	flhA	SO3213	0.44	+0.7