Strain Fitness in Shewanella oneidensis MR-1 around SO3170

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
3,304,747	+		SO3168	0.65	+1.0
3,304,753	+		SO3168	0.66	+0.2
3,304,755	-		SO3168	0.66	-2.4
3,304,798	+		SO3168	0.70	-0.3
3,304,803	+		SO3168	0.70	-0.6
3,304,806	-		SO3168	0.70	+0.5
3,304,816	-		SO3168	0.71	+0.7
3,304,820	-		SO3168	0.71	+0.3
3,304,994	-		SO3168	0.86	-1.4
3,305,135	-				+0.4
3,305,239	+				+0.6
3,305,261	+				+0.4
3,305,470	-		SO3169	0.29	+0.0
3,305,688	+		SO3169	0.86	-0.5
3,305,688	+		SO3169	0.86	-1.3
3,305,881	+		SO3170	0.11	+1.2
3,305,935	+		SO3170	0.14	+1.9
3,305,947	+		SO3170	0.15	+0.5
3,306,002	+		SO3170	0.19	-0.8
3,306,002	+		SO3170	0.19	-0.0
3,306,002	+		SO3170	0.19	+0.0
3,306,010	-		SO3170	0.20	+1.2
3,306,046	+		SO3170	0.23	-0.9
3,306,488	+		SO3170	0.55	+0.8
3,306,488	+		SO3170	0.55	+0.2
3,306,488	+		SO3170	0.55	-0.1
3,306,520	-		SO3170	0.57	+0.4
3,306,617	-		SO3170	0.64	+0.4
3,306,660	-		SO3170	0.67	-0.2
3,306,697	+		SO3170	0.70	+0.5
3,306,702	+		SO3170	0.71	+0.6
3,306,845	+		SO3170	0.81	+0.5
3,306,845	-		SO3170	0.81	+0.4
3,307,050	+				+0.5
3,307,322	-				+1.1
3,307,418	+				+0.1
3,307,437	+				+0.3
3,307,444	-				+0.4
3,307,444	-				-0.3
3,307,711	-				+1.2
3,307,901	+		SO3171	0.14	+0.2
3,307,937	+		SO3171	0.16	-2.5
3,307,945	+		SO3171	0.17	+1.8
3,307,945	+		SO3171	0.17	+0.4
3,308,064	-		SO3171	0.23	-1.0
3,308,095	-		SO3171	0.24	-0.7