Strain Fitness in Shewanella oneidensis MR-1 around SO2618

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
2,752,526	-	dcd	SO2616	0.60	-3.4
2,753,076	-	udk	SO2617	0.45	+0.5
2,753,143	+	udk	SO2617	0.56	-0.4
2,753,194	-	udk	SO2617	0.64	-0.1
2,753,221	-	udk	SO2617	0.68	+1.1
2,753,436	-				+1.8
2,753,623	-		SO2618	0.17	-2.8
2,753,623	-		SO2618	0.17	-2.7
2,753,744	-		SO2618	0.28	-3.3
2,753,907	-		SO2618	0.42	-2.8
2,753,984	-		SO2618	0.49	-3.4
2,754,065	+		SO2618	0.56	-1.3
2,754,157	+		SO2618	0.65	-2.7
2,754,448	+				-1.2
2,754,456	-				-3.9
2,754,456	-				-4.0
2,754,462	-				-4.5
2,754,501	-				-3.2
2,754,501	-				-2.7