Strain Fitness in Shewanella oneidensis MR-1 around SO2580

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
2,705,825	+	minD	SO2577	0.53	-2.8
2,705,880	-	minD	SO2577	0.60	+0.7
2,705,903	+	minD	SO2577	0.62	+0.0
2,706,119	-	minD	SO2577	0.89	+0.5
2,706,135	+				+0.0
2,706,607	-				+0.5
2,706,980	-	rnd	SO2580	0.25	-0.6
2,707,060	-	rnd	SO2580	0.32	+0.6
2,707,105	+	rnd	SO2580	0.36	-0.6
2,707,113	-	rnd	SO2580	0.37	+0.3
2,707,152	-	rnd	SO2580	0.40	+1.5
2,707,158	+	rnd	SO2580	0.41	+0.1
2,707,441	+	rnd	SO2580	0.67	+0.8
2,707,462	+	rnd	SO2580	0.68	+0.1
2,707,470	-	rnd	SO2580	0.69	+0.0
2,707,470	-	rnd	SO2580	0.69	-1.2
2,707,934	-				+0.0
2,707,951	+				-1.8
2,708,357	-	fadD-1	SO2581	0.28	-1.4
2,708,468	+	fadD-1	SO2581	0.35	-2.6
2,708,715	-	fadD-1	SO2581	0.50	-0.3
2,708,715	-	fadD-1	SO2581	0.50	-1.3