Strain Fitness in Shewanella oneidensis MR-1 around SO2472
Experiment: Paraquat dichloride 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.5 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,594,244 | + | +0.6 | |||
| 2,594,257 | + | -3.2 | |||
| 2,594,257 | + | -5.6 | |||
| 2,594,342 | + | SO2472 | 0.16 | -3.4 | |
| 2,594,801 | + | SO2472 | 0.77 | -5.7 | |
| 2,594,801 | + | SO2472 | 0.77 | -3.9 | |
| 2,594,970 | + | -0.9 | |||
| 2,595,096 | + | +0.2 | |||
| 2,595,146 | + | SO2473 | 0.12 | -0.0 | |
| 2,595,148 | + | SO2473 | 0.12 | -0.4 | |
| 2,595,290 | + | SO2473 | 0.29 | +0.0 | |
| 2,595,458 | + | SO2473 | 0.49 | -0.7 | |
| 2,595,518 | - | SO2473 | 0.57 | +0.3 | |
| 2,595,597 | - | SO2473 | 0.66 | -1.7 | |
| 2,595,657 | + | SO2473 | 0.73 | -0.1 | |
| 2,595,703 | + | SO2473 | 0.79 | +0.7 | |
| 2,595,706 | - | SO2473 | 0.79 | -1.1 | |
| 2,595,721 | - | SO2473 | 0.81 | -1.0 | |
| 2,595,734 | - | SO2473 | 0.82 | -0.7 | |
| 2,595,858 | - | +0.7 | |||
| 2,595,908 | + | +0.2 |
Or see this region's nucleotide sequence