Strain Fitness in Shewanella oneidensis MR-1 around SO2417
Experiment: Paraquat dichloride 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.5 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,524,613 | + | SO2417 | 0.55 | -1.3 | |
| 2,524,621 | - | SO2417 | 0.57 | +0.3 | |
| 2,524,623 | + | SO2417 | 0.57 | -2.6 | |
| 2,524,675 | - | SO2417 | 0.69 | -2.2 | |
| 2,524,870 | - | -0.1 | |||
| 2,524,931 | + | -1.3 | |||
| 2,525,073 | - | -0.2 |
Or see this region's nucleotide sequence