Strain Fitness in Shewanella oneidensis MR-1 around SO2189

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
2,299,716	+				-1.6
2,299,726	+				-0.2
2,299,758	-				-1.0
2,299,855	+				-0.9
2,299,984	+				+0.2
2,299,984	+				+2.2
2,299,992	-				-1.5
2,300,012	+				-0.4
2,300,082	-				+0.2
2,300,145	-				-0.0
2,300,159	-				-0.3
2,300,339	-		SO2189	0.21	-0.5
2,300,393	+		SO2189	0.25	-0.8
2,300,401	-		SO2189	0.25	-0.4
2,300,419	+		SO2189	0.26	-0.3
2,300,459	-		SO2189	0.29	-0.1
2,300,548	-		SO2189	0.35	-2.7
2,300,594	+		SO2189	0.38	+0.8
2,300,653	+		SO2189	0.42	-2.1
2,300,796	+		SO2189	0.52	-3.0
2,300,796	+		SO2189	0.52	+0.6
2,300,804	-		SO2189	0.53	-0.8
2,300,804	-		SO2189	0.53	-0.8
2,300,804	-		SO2189	0.53	-1.0
2,300,831	+		SO2189	0.55	+0.5
2,300,909	+		SO2189	0.60	-0.7
2,301,064	+		SO2189	0.71	-0.5
2,301,224	+		SO2189	0.82	+0.1
2,301,592	+	creA	SO2190	0.17	+0.1
2,302,069	+				-0.3
2,302,081	-				-2.5
2,302,103	+				+1.0
2,302,229	+				-0.6
2,302,386	-	metC	SO2191	0.23	+1.7
2,302,463	+	metC	SO2191	0.29	+0.4