Strain Fitness in Shewanella oneidensis MR-1 around SO1894

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
1,990,469	+				-2.3
1,990,553	-				-3.6
1,990,591	+				-1.6
1,990,591	+				-1.5
1,990,591	+				-2.3
1,990,599	-				-4.2
1,990,599	-				-4.3
1,990,599	-				-1.8
1,990,623	+				+0.0
1,990,631	-				-2.4
1,990,633	+				-3.3
1,990,700	-		SO1894	0.13	-3.3
1,990,726	+		SO1894	0.14	-2.8
1,990,726	+		SO1894	0.14	-1.1
1,990,734	-		SO1894	0.15	-0.3
1,990,817	+		SO1894	0.19	-2.3
1,990,959	-		SO1894	0.25	-1.7
1,990,964	-		SO1894	0.26	-1.8
1,990,994	-		SO1894	0.27	-1.7
1,991,175	-		SO1894	0.36	-4.2
1,991,262	+		SO1894	0.40	-1.0
1,991,386	+		SO1894	0.46	-3.3
1,991,474	+		SO1894	0.50	-2.8
1,991,482	-		SO1894	0.51	-3.0
1,991,592	+		SO1894	0.56	-2.5
1,991,611	+		SO1894	0.57	-2.6
1,991,789	+		SO1894	0.65	+0.1
1,992,007	+		SO1894	0.76	-2.1
1,992,007	+		SO1894	0.76	-1.7
1,992,015	-		SO1894	0.76	-2.5
1,992,194	+		SO1894	0.85	-2.8
1,992,234	+		SO1894	0.87	-0.6
1,992,409	+				-4.0
1,992,409	+				-1.1
1,992,409	+				-1.9
1,992,409	+				-2.0
1,992,409	+				-3.3
1,992,417	-				-1.3
1,992,417	-				-1.8
1,992,417	-				-2.3
1,992,427	-				-1.8
1,992,495	+				-2.6
1,992,584	+				-1.7
1,992,663	+		SO1895	0.17	-0.3
1,992,826	+		SO1895	0.36	-2.2
1,992,968	+		SO1895	0.53	-2.3
1,992,980	+		SO1895	0.54	-3.1
1,992,980	+		SO1895	0.54	-2.4
1,993,056	+		SO1895	0.63	-4.3
1,993,228	+		SO1895	0.83	-1.7
1,993,261	+		SO1895	0.86	-3.1
1,993,312	+				-2.3
1,993,355	+				-1.6