Strain Fitness in Shewanella oneidensis MR-1 around SO1665

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
1,751,280	-				+0.5
1,751,352	+	galE	SO1664	0.14	-0.6
1,751,364	+	galE	SO1664	0.15	-0.1
1,751,388	+	galE	SO1664	0.17	+1.3
1,751,388	+	galE	SO1664	0.17	+0.1
1,751,414	-	galE	SO1664	0.20	+0.2
1,751,440	-	galE	SO1664	0.22	+0.2
1,751,457	-	galE	SO1664	0.24	-0.8
1,751,493	+	galE	SO1664	0.28	+0.2
1,751,493	+	galE	SO1664	0.28	+1.1
1,751,501	-	galE	SO1664	0.28	-1.9
1,751,550	-	galE	SO1664	0.33	-1.3
1,751,663	+	galE	SO1664	0.44	-1.8
1,751,700	-	galE	SO1664	0.48	+0.5
1,751,700	-	galE	SO1664	0.48	-1.9
1,751,700	-	galE	SO1664	0.48	+0.3
1,751,908	+	galE	SO1664	0.69	+0.3
1,751,916	-	galE	SO1664	0.69	+0.4
1,751,916	-	galE	SO1664	0.69	+0.8
1,751,916	-	galE	SO1664	0.69	+0.1
1,752,101	+	galE	SO1664	0.88	+0.7
1,752,101	+	galE	SO1664	0.88	+0.1
1,752,109	-	galE	SO1664	0.88	-0.3
1,752,109	-	galE	SO1664	0.88	-0.6
1,752,316	+				-4.3
1,752,316	+				-1.1
1,752,707	+	galU	SO1665	0.53	-4.0
1,752,707	+	galU	SO1665	0.53	-5.3
1,752,715	-	galU	SO1665	0.54	-4.0
1,752,753	-	galU	SO1665	0.58	-5.3
1,752,793	+	galU	SO1665	0.62	-4.3
1,752,799	+	galU	SO1665	0.63	-4.3
1,752,799	+	galU	SO1665	0.63	-4.8
1,752,807	-				-0.2
1,752,829	-	galU	SO1665	0.66	-3.7
1,753,015	+	galU	SO1665	0.87	-3.5
1,753,141	+				-2.8
1,753,280	-				+0.8
1,753,280	-				+0.6
1,753,291	+				-0.6
1,753,618	+	phhA	SO1666	0.20	+0.1
1,753,626	-	phhA	SO1666	0.21	+0.4
1,753,643	+	phhA	SO1666	0.23	-1.1
1,753,719	+	phhA	SO1666	0.32	+0.3
1,753,721	-	phhA	SO1666	0.32	-0.8
1,753,932	-	phhA	SO1666	0.58	-0.2
1,753,958	+	phhA	SO1666	0.61	-0.0
1,753,984	+	phhA	SO1666	0.64	+0.8
1,753,992	-	phhA	SO1666	0.65	+0.0
1,753,993	-	phhA	SO1666	0.66	+0.6
1,754,105	+	phhA	SO1666	0.79	-0.7
1,754,111	+	phhA	SO1666	0.80	+0.2
1,754,113	-	phhA	SO1666	0.80	-0.6
1,754,113	-	phhA	SO1666	0.80	-1.8