Strain Fitness in Shewanella oneidensis MR-1 around SO1597

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
1,667,521	+				-1.8
1,667,536	+				+0.2
1,667,614	-				-0.2
1,667,636	+				+0.1
1,667,636	+				-0.5
1,667,636	+				-0.8
1,667,636	+				+0.9
1,667,636	+				+0.3
1,667,636	+				-0.8
1,667,636	+				+0.0
1,667,638	+				+0.1
1,667,638	+				-0.5
1,667,644	-				+0.1
1,667,644	-				-0.3
1,667,644	-				-0.1
1,667,644	-				+0.4
1,667,644	-				-1.1
1,667,646	+				+0.4
1,667,661	-				-0.2
1,667,691	-				-0.2
1,667,705	+				+0.3
1,667,726	+				+0.2
1,667,726	+				+0.2
1,667,734	-				-1.1
1,667,734	-				-1.4
1,667,734	-				+0.7
1,667,734	-				+1.0
1,667,749	-				+0.2
1,667,813	+				+0.1
1,667,850	-				+0.3
1,667,855	+				-1.2
1,667,855	+				-0.6
1,668,290	+				-0.8
1,668,290	+				-0.6
1,668,290	+				-0.2
1,668,311	-				-0.2
1,668,386	-				-0.6
1,668,401	-				+0.1
1,668,465	-				+0.0
1,668,470	-				+0.9
1,668,514	-				-0.6
1,668,527	-				-1.9
1,668,722	+		SO1597	0.14	-1.3
1,668,741	-		SO1597	0.15	-1.2
1,668,835	+		SO1597	0.21	-2.8
1,668,858	+		SO1597	0.22	-2.1
1,668,972	-		SO1597	0.29	-0.5
1,669,066	+		SO1597	0.35	-2.4
1,669,199	+		SO1597	0.43	-1.5
1,669,207	-		SO1597	0.43	-1.6
1,669,220	+		SO1597	0.44	-2.5
1,669,396	-		SO1597	0.55	-0.6
1,669,415	-		SO1597	0.56	-2.0
1,669,419	+		SO1597	0.56	-1.8
1,669,427	-		SO1597	0.57	-1.5
1,669,427	-		SO1597	0.57	-2.0
1,669,464	-		SO1597	0.59	-1.9
1,669,525	+		SO1597	0.63	-2.2
1,669,528	-		SO1597	0.63	-2.0
1,669,528	-		SO1597	0.63	-2.7
1,669,600	-		SO1597	0.67	-2.4
1,669,676	-		SO1597	0.72	-1.4
1,669,685	-		SO1597	0.72	-1.7
1,669,738	-		SO1597	0.75	-1.6
1,669,877	+		SO1597	0.84	-1.3
1,669,931	-		SO1597	0.87	-1.0
1,669,976	+				-2.7
1,669,978	-				-2.4
1,670,083	+				-2.3
1,670,083	+				-2.5
1,670,091	-				-0.8
1,670,123	-				-2.4
1,670,193	+				-0.2
1,670,200	+				-1.1
1,670,201	-				-0.7
1,670,368	+				-0.3
1,670,368	+				-1.0
1,670,376	-				-0.8
1,670,378	+				-2.0
1,670,526	+				-2.1
1,670,534	-				-1.5
1,670,544	+				-4.5
1,670,544	+				-1.8
1,670,544	-				-1.8
1,670,654	+				-2.9
1,670,654	+				-2.1
1,670,654	+				-0.7
1,670,662	-				-1.1
1,670,662	-				-1.5
1,670,662	-				-0.7
1,670,679	-				-3.3
1,670,767	-				-0.8
1,670,905	+		SO1599	0.10	-2.3
1,670,914	-		SO1599	0.10	-2.3
1,670,935	+		SO1599	0.11	-2.0
1,671,020	-		SO1599	0.12	-2.1
1,671,117	+		SO1599	0.14	-1.9
1,671,117	+		SO1599	0.14	-1.8
1,671,117	+		SO1599	0.14	-2.1
1,671,117	+		SO1599	0.14	-2.0
1,671,117	+		SO1599	0.14	-1.4
1,671,117	+		SO1599	0.14	-2.0
1,671,124	-		SO1599	0.14	-0.6
1,671,125	-		SO1599	0.14	-1.4
1,671,125	-		SO1599	0.14	-2.9
1,671,125	-		SO1599	0.14	-1.5