Strain Fitness in Shewanella oneidensis MR-1 around SO1314

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
1,368,911	+		SO1313	0.33	+0.0
1,368,925	+		SO1313	0.34	-1.1
1,369,015	-		SO1313	0.42	-1.1
1,369,075	-		SO1313	0.48	+0.6
1,369,098	+		SO1313	0.50	-0.5
1,369,271	+		SO1313	0.65	-0.4
1,369,271	+		SO1313	0.65	+0.4
1,369,319	+		SO1313	0.70	-1.4
1,369,492	-		SO1313	0.85	-1.7
1,369,508	-		SO1313	0.87	-0.6
1,369,508	-		SO1313	0.87	-0.5
1,369,509	+		SO1313	0.87	-0.4
1,369,517	-		SO1313	0.87	-1.1
1,369,548	-				-0.3
1,369,626	+				+0.4
1,369,759	-				+0.2
1,369,859	-		SO1314	0.13	-0.5
1,369,896	+		SO1314	0.15	-0.7
1,369,897	+		SO1314	0.15	-1.2
1,369,928	-		SO1314	0.17	-0.1
1,369,970	-		SO1314	0.20	+0.6
1,370,005	+		SO1314	0.23	-3.1
1,370,081	-		SO1314	0.28	-0.5
1,370,085	+		SO1314	0.28	-1.3
1,370,085	+		SO1314	0.28	-0.9
1,370,085	+		SO1314	0.28	-1.6
1,370,085	+		SO1314	0.28	-2.1
1,370,093	-		SO1314	0.29	-0.4
1,370,093	-		SO1314	0.29	+0.4
1,370,093	-		SO1314	0.29	+0.3
1,370,093	-		SO1314	0.29	+0.5
1,370,093	-		SO1314	0.29	+1.1
1,370,093	-		SO1314	0.29	-0.2
1,370,106	+		SO1314	0.30	-1.4
1,370,150	+		SO1314	0.33	-0.8
1,370,230	-		SO1314	0.38	+0.2
1,370,309	-		SO1314	0.44	-0.6
1,370,348	+		SO1314	0.46	-0.4
1,370,356	-		SO1314	0.47	-2.0
1,370,356	-		SO1314	0.47	-0.5
1,370,372	+		SO1314	0.48	-0.7
1,370,470	-		SO1314	0.55	-0.1
1,370,470	-		SO1314	0.55	+0.7
1,370,516	+		SO1314	0.58	-0.5
1,370,699	+		SO1314	0.71	-2.2
1,370,741	+		SO1314	0.73	-3.3
1,370,802	+		SO1314	0.78	-1.4
1,370,812	+		SO1314	0.78	+0.3
1,370,814	+		SO1314	0.79	+0.1
1,370,868	-		SO1314	0.82	-0.4
1,370,869	+		SO1314	0.82	-0.7
1,370,877	-		SO1314	0.83	+0.0
1,370,894	+		SO1314	0.84	-0.2
1,370,902	-		SO1314	0.85	-0.2
1,370,915	+		SO1314	0.86	-1.0
1,370,940	-		SO1314	0.87	-0.7
1,371,077	+				-0.9
1,371,092	+				-0.7