Strain Fitness in Shewanella oneidensis MR-1 around SO1067

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
1,107,301	-		SO1066	0.68	-0.3
1,107,317	+		SO1066	0.69	+0.3
1,107,317	+		SO1066	0.69	+0.9
1,107,326	+		SO1066	0.69	+0.2
1,107,335	-		SO1066	0.69	-0.9
1,107,352	+		SO1066	0.70	-0.2
1,107,354	-		SO1066	0.70	-0.6
1,107,386	+		SO1066	0.71	+0.2
1,107,386	+		SO1066	0.71	-2.0
1,107,386	+		SO1066	0.71	+0.4
1,107,386	+		SO1066	0.71	-2.0
1,107,394	-		SO1066	0.72	+0.7
1,107,394	-		SO1066	0.72	+0.9
1,107,398	+		SO1066	0.72	+0.0
1,107,405	+		SO1066	0.72	+0.3
1,107,413	-		SO1066	0.72	+0.1
1,107,461	+		SO1066	0.74	+0.4
1,107,486	-		SO1066	0.75	-0.2
1,107,523	+		SO1066	0.76	-0.4
1,107,560	+		SO1066	0.78	+0.3
1,107,722	+		SO1066	0.84	+0.4
1,107,730	+		SO1066	0.84	+0.5
1,107,731	+		SO1066	0.84	+2.0
1,107,754	+		SO1066	0.85	+1.1
1,107,792	+		SO1066	0.87	+1.2
1,107,811	-		SO1066	0.87	+0.4
1,107,855	+		SO1066	0.89	+0.5
1,107,898	-				+0.5
1,107,912	+				-0.1
1,107,912	+				-1.2
1,107,912	+				-1.0
1,107,920	-				+0.2
1,107,922	+				-0.4
1,107,930	-				+0.4
1,107,986	+				-0.4
1,107,988	-				+0.4
1,108,049	-				+1.3
1,108,073	+				-0.8
1,108,106	+				+0.3
1,108,170	-				+0.2
1,108,213	+				-0.2
1,108,263	-				+0.1
1,108,263	-				+0.1
1,108,285	+				-0.5
1,108,320	-		SO1067	0.11	-3.0
1,108,410	-		SO1067	0.30	-0.6
1,108,410	-		SO1067	0.30	-1.0
1,108,434	-		SO1067	0.36	-0.6
1,108,434	-		SO1067	0.36	-0.2
1,108,503	+		SO1067	0.51	-0.6
1,108,648	+		SO1067	0.82	-1.5
1,108,736	-				-0.1
1,108,861	+				-0.8
1,108,869	-				+0.7
1,108,869	-				-1.1
1,108,869	-				-1.3
1,108,914	+		SO1068	0.18	+1.0
1,108,921	-		SO1068	0.19	-2.4
1,108,951	-		SO1068	0.26	-0.3
1,109,005	+		SO1068	0.39	-0.2
1,109,025	+		SO1068	0.43	-0.8
1,109,210	+		SO1068	0.85	-0.3
1,109,218	+		SO1068	0.87	-1.9
1,109,231	-				+0.2
1,109,285	-				-0.1
1,109,324	+				-0.4
1,109,324	+				+1.7
1,109,324	+				-0.2
1,109,473	+		SO1069	0.59	+0.7