Strain Fitness in Shewanella oneidensis MR-1 around SO1020

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
1,058,376	+	nuoCD	SO1019	0.55	+1.7
1,058,384	-	nuoCD	SO1019	0.55	+1.7
1,058,459	-	nuoCD	SO1019	0.59	+1.6
1,058,494	+	nuoCD	SO1019	0.61	+2.0
1,058,597	-	nuoCD	SO1019	0.67	+1.9
1,058,670	+	nuoCD	SO1019	0.71	+0.6
1,058,676	+	nuoCD	SO1019	0.71	+1.4
1,058,684	-	nuoCD	SO1019	0.72	+0.8
1,058,740	+	nuoCD	SO1019	0.75	+1.8
1,058,748	+	nuoCD	SO1019	0.75	+1.9
1,059,087	+				+2.2
1,059,195	+				+1.8
1,059,325	+	nuoB	SO1020	0.19	+1.2
1,059,349	+	nuoB	SO1020	0.23	+1.1
1,059,357	-	nuoB	SO1020	0.24	+1.7
1,059,474	-	nuoB	SO1020	0.41	+1.7
1,059,479	-	nuoB	SO1020	0.42	+1.6
1,059,649	-	nuoB	SO1020	0.67	+2.2
1,059,656	-	nuoB	SO1020	0.68	+1.6
1,059,726	-	nuoB	SO1020	0.78	+2.8
1,059,742	+	nuoB	SO1020	0.81	+2.4
1,059,742	+	nuoB	SO1020	0.81	+0.6
1,059,822	-				+1.6
1,059,975	-	nuoA	SO1021	0.18	+1.8
1,060,171	-	nuoA	SO1021	0.67	+1.7
1,060,180	-	nuoA	SO1021	0.69	+1.6
1,060,274	+				+2.8
1,060,274	+				+2.0
1,060,274	+				+2.3
1,060,282	-				+2.7
1,060,282	-				+2.0
1,060,415	+				+1.4
1,060,468	-				+2.3
1,060,502	-				+1.1
1,060,502	-				+2.2
1,060,530	+				-0.9
1,060,613	+				+0.3
1,060,689	+				-2.0
1,060,697	-				-0.1
1,060,703	+				-0.0
1,060,742	-				+0.3
1,060,745	+				-0.8
1,060,753	-				+1.1
1,060,753	-				-1.1
1,060,870	-				+0.3