Strain Fitness in Shewanella oneidensis MR-1 around SO1009

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
1,044,325	+		SO1008	0.38	-0.7
1,044,344	-		SO1008	0.41	+0.6
1,044,344	-		SO1008	0.41	+0.9
1,044,417	+		SO1008	0.49	-3.9
1,044,425	-		SO1008	0.50	-0.4
1,044,425	-		SO1008	0.50	-3.1
1,044,425	-		SO1008	0.50	+0.3
1,044,456	-		SO1008	0.53	+1.2
1,044,535	+		SO1008	0.62	+0.4
1,044,579	-		SO1008	0.67	-0.4
1,044,612	-		SO1008	0.71	+1.1
1,044,614	-		SO1008	0.71	+0.2
1,044,652	+		SO1008	0.76	+0.4
1,044,660	-		SO1008	0.77	-0.1
1,044,729	+		SO1008	0.84	+0.2
1,044,729	+		SO1008	0.84	-0.8
1,044,729	+		SO1008	0.84	+0.0
1,044,737	-		SO1008	0.85	+0.4
1,044,737	-		SO1008	0.85	-0.6
1,044,737	-		SO1008	0.85	+0.0
1,044,753	+		SO1008	0.87	+0.7
1,044,820	-				-0.8
1,044,843	-				-0.7
1,044,843	-				-0.6
1,044,857	-				+0.4
1,044,859	-				-0.9
1,044,908	+				+1.0
1,045,061	-				-2.4
1,045,063	-				-0.4
1,045,079	-				-0.4
1,045,081	+				-1.1
1,045,083	+				+0.8
1,045,083	+				-0.4
1,045,083	+				+0.5
1,045,083	+				+0.0
1,045,083	+				-0.8
1,045,089	-				+0.4
1,045,091	+				+0.7
1,045,091	+				-0.4
1,045,091	+				+0.8
1,045,091	+				+0.1
1,045,091	-				+0.2
1,045,091	-				+0.6
1,045,093	+				-0.5
1,045,099	-				-0.2
1,045,099	-				+0.1
1,045,114	-				+0.0
1,045,140	-				-0.1
1,045,150	-				-0.9
1,045,163	+				+0.6
1,045,172	+				+1.1
1,045,172	+				-0.5
1,045,172	+				+0.9
1,045,172	+				+0.7
1,045,180	-				+0.9
1,045,233	+				+0.9
1,045,299	+				+1.0
1,045,445	+	nuoN	SO1009	0.11	+2.2
1,045,457	+	nuoN	SO1009	0.12	+1.7
1,045,560	-	nuoN	SO1009	0.19	+1.5
1,045,639	-	nuoN	SO1009	0.24	+0.9
1,045,639	-	nuoN	SO1009	0.24	+1.9
1,045,708	+	nuoN	SO1009	0.29	+1.7
1,045,726	-	nuoN	SO1009	0.30	-1.8
1,045,781	+	nuoN	SO1009	0.34	+1.2
1,045,878	-	nuoN	SO1009	0.41	+1.7
1,046,047	+	nuoN	SO1009	0.52	+2.1
1,046,065	+	nuoN	SO1009	0.54	+0.4
1,046,153	-	nuoN	SO1009	0.60	+1.3
1,046,189	+	nuoN	SO1009	0.62	+1.9
1,046,217	-	nuoN	SO1009	0.64	+1.4
1,046,232	+	nuoN	SO1009	0.65	+1.4
1,046,232	-	nuoN	SO1009	0.65	+1.6
1,046,399	-	nuoN	SO1009	0.76	+1.2
1,046,461	+	nuoN	SO1009	0.81	+0.9
1,046,478	+	nuoN	SO1009	0.82	+0.9
1,046,479	-	nuoN	SO1009	0.82	+1.3
1,046,499	+	nuoN	SO1009	0.83	-0.5
1,046,535	-	nuoN	SO1009	0.86	+1.8
1,046,915	-	nuoM	SO1010	0.11	+0.4
1,046,915	-	nuoM	SO1010	0.11	+1.3
1,046,955	+	nuoM	SO1010	0.14	+1.8
1,046,961	+	nuoM	SO1010	0.14	+0.6
1,047,116	+	nuoM	SO1010	0.24	+0.6
1,047,190	+	nuoM	SO1010	0.29	+1.3
1,047,240	+	nuoM	SO1010	0.32	+0.6
1,047,245	+	nuoM	SO1010	0.33	+0.6
1,047,360	+	nuoM	SO1010	0.40	+0.6
1,047,516	+	nuoM	SO1010	0.50	+1.3
1,047,516	-	nuoM	SO1010	0.50	+0.7
1,047,599	+	nuoM	SO1010	0.56	+0.2
1,047,632	-	nuoM	SO1010	0.58	+0.5
1,047,634	+	nuoM	SO1010	0.58	+0.4
1,047,642	-	nuoM	SO1010	0.58	+1.5