Strain Fitness in Shewanella oneidensis MR-1 around SO0071

Experiment: Paraquat dichloride 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.5 mg/ml
81,666	-		SO0069	0.88	-0.7
81,697	+				-0.5
81,705	-				-0.2
81,729	-				+1.3
81,771	-				-1.2
81,771	-				+0.1
81,876	+				-0.1
81,919	-				-0.1
81,939	-				-0.9
81,964	-				-0.8
81,977	+				-2.9
81,982	+	natA	SO0070	0.11	+0.5
82,008	+	natA	SO0070	0.14	-0.1
82,010	+	natA	SO0070	0.14	-0.9
82,015	+	natA	SO0070	0.15	-1.5
82,015	+	natA	SO0070	0.15	-0.9
82,023	-	natA	SO0070	0.16	-0.7
82,035	+	natA	SO0070	0.18	+0.3
82,124	-	natA	SO0070	0.30	-1.5
82,146	+	natA	SO0070	0.33	-0.4
82,192	+	natA	SO0070	0.39	+0.8
82,376	-	natA	SO0070	0.64	-1.8
82,376	-	natA	SO0070	0.64	-0.8
82,427	-	natA	SO0070	0.71	-0.8
82,489	-	natA	SO0070	0.80	-0.9
82,534	-	natA	SO0070	0.86	-1.8
82,591	+				-1.8
82,599	-				-0.3
82,665	-				+0.7
82,677	-				+0.3
82,711	-				-0.4
82,844	-		SO0071	0.13	-0.0
82,844	-		SO0071	0.13	+0.3
82,915	+		SO0071	0.17	+0.6
82,936	+		SO0071	0.18	-1.1
82,949	-		SO0071	0.19	+0.2
82,961	+		SO0071	0.20	+0.1
82,961	+		SO0071	0.20	+0.2
82,961	+		SO0071	0.20	-0.4
82,963	+		SO0071	0.20	-0.9
82,969	-		SO0071	0.20	+0.3
82,971	-		SO0071	0.20	+0.1
82,993	-		SO0071	0.22	-0.3
83,216	-		SO0071	0.35	-1.2
83,237	+		SO0071	0.37	-0.1
83,237	+		SO0071	0.37	-1.0
83,245	-		SO0071	0.37	-0.9
83,245	-		SO0071	0.37	-1.5
83,319	+		SO0071	0.42	-0.6
83,319	+		SO0071	0.42	-1.1
83,380	-		SO0071	0.46	+0.1
83,380	-		SO0071	0.46	+0.1
83,398	+		SO0071	0.47	-0.5
83,398	+		SO0071	0.47	+1.2
83,398	+		SO0071	0.47	+0.6
83,406	-		SO0071	0.47	-1.4
83,513	+		SO0071	0.54	-1.5
83,513	+		SO0071	0.54	-0.5
83,521	-		SO0071	0.54	-0.2
83,523	+		SO0071	0.54	+0.2
83,559	-		SO0071	0.57	-0.3
83,568	+		SO0071	0.57	-2.0
83,641	+		SO0071	0.62	-0.1
83,649	-		SO0071	0.62	-1.0
83,667	-		SO0071	0.63	+0.3
83,668	-		SO0071	0.63	-1.2
83,678	+		SO0071	0.64	-0.2
83,686	-		SO0071	0.65	-0.5
83,806	+		SO0071	0.72	-1.1
83,861	-		SO0071	0.75	+0.1
83,863	+		SO0071	0.75	+0.3
83,863	+		SO0071	0.75	-0.1
83,863	+		SO0071	0.75	-0.8
83,871	-		SO0071	0.76	-0.3
83,871	-		SO0071	0.76	-0.1
83,871	-		SO0071	0.76	-2.7
83,871	-		SO0071	0.76	-0.3
83,871	-		SO0071	0.76	-0.8
83,871	-		SO0071	0.76	+0.5
83,871	-		SO0071	0.76	-0.9
83,883	+		SO0071	0.77	+0.3
83,891	-		SO0071	0.77	-0.3
83,897	+		SO0071	0.78	-0.4
83,897	+		SO0071	0.78	+0.1
83,897	+		SO0071	0.78	-1.8
83,916	+		SO0071	0.79	-1.7
83,916	+		SO0071	0.79	-0.9
83,924	-		SO0071	0.79	-1.3
83,924	-		SO0071	0.79	-0.2
83,974	+		SO0071	0.82	+0.7
84,056	+		SO0071	0.87	-0.3
84,190	+				+0.3
84,219	-				+0.6
84,485	+		SO0072	0.35	-2.8
84,493	-		SO0072	0.38	-3.8
84,547	+		SO0072	0.52	-4.9
84,552	+		SO0072	0.53	-4.3
84,552	+		SO0072	0.53	-2.9
84,552	+		SO0072	0.53	-2.8
84,552	+		SO0072	0.53	-2.7
84,552	+		SO0072	0.53	-3.9
84,552	+		SO0072	0.53	-4.5
84,552	+		SO0072	0.53	-4.9
84,560	-		SO0072	0.56	-1.5
84,560	-		SO0072	0.56	-1.0
84,564	+		SO0072	0.57	-4.0
84,564	+		SO0072	0.57	-3.5
84,672	+		SO0072	0.86	-2.9
84,855	+		SO0073	0.10	+0.5
84,939	+		SO0073	0.20	-0.3
84,946	+		SO0073	0.21	-0.5
84,979	-		SO0073	0.25	+0.4
84,996	+		SO0073	0.27	+0.2
85,012	+		SO0073	0.29	+0.4
85,029	+		SO0073	0.31	+0.3
85,055	-		SO0073	0.34	-0.6
85,141	-		SO0073	0.44	+0.9
85,153	+		SO0073	0.45	-0.3
85,234	+		SO0073	0.54	+0.2
85,234	+		SO0073	0.54	+0.3