Strain Fitness in Marinobacter adhaerens HP15 around HP15_316

Experiment: pyruvate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_315 and HP15_316 are separated by 133 nucleotidesHP15_316 and HP15_317 are separated by 149 nucleotidesHP15_317 and HP15_318 are separated by 253 nucleotides HP15_315: HP15_315 - RNA polymerase, sigma 70 subunit, RpoD, at 311,353 to 313,200 _315 HP15_316: HP15_316 - protein containing DNA primase, DnaG/TOPRIM, at 313,334 to 315,061 _316 HP15_317: HP15_317 - ribosomal protein S21, at 315,211 to 315,411 _317 HP15_318: HP15_318 - metalloendopeptidase, glycoprotease family, at 315,665 to 316,720 _318 Position (kb) 313 314 315 316Strain fitness (log2 ratio) -1 0 1at 313.328 kb on - strandat 315.154 kb on - strandat 315.601 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate
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313,328 - +0.6
315,154 - +0.6
315,601 + +0.5

Or see this region's nucleotide sequence