Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3432 and Dsui_3433 are separated by 124 nucleotides Dsui_3433 and Dsui_3434 are separated by 82 nucleotides
Dsui_3432: Dsui_3432 - outer membrane protein, at 3,684,446 to 3,685,723
_3432
Dsui_3433: Dsui_3433 - putative acetyltransferase, at 3,685,848 to 3,686,354
_3433
Dsui_3434: Dsui_3434 - hypothetical protein, at 3,686,437 to 3,686,694
_3434
Position (kb)
3685
3686
3687 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3684.955 kb on + strand, within Dsui_3432 at 3685.030 kb on + strand, within Dsui_3432 at 3685.038 kb on - strand at 3685.049 kb on - strand at 3685.194 kb on + strand, within Dsui_3432 at 3685.212 kb on - strand at 3685.246 kb on + strand, within Dsui_3432 at 3685.251 kb on + strand, within Dsui_3432 at 3685.275 kb on + strand, within Dsui_3432 at 3685.283 kb on - strand at 3685.283 kb on - strand, within Dsui_3432 at 3685.396 kb on - strand, within Dsui_3432 at 3685.435 kb on + strand, within Dsui_3432 at 3685.680 kb on + strand at 3685.688 kb on - strand at 3685.763 kb on + strand at 3686.050 kb on - strand, within Dsui_3433 at 3686.124 kb on - strand, within Dsui_3433 at 3686.217 kb on - strand at 3686.226 kb on + strand at 3686.288 kb on - strand at 3686.294 kb on - strand at 3686.389 kb on - strand at 3686.404 kb on - strand at 3686.467 kb on + strand, within Dsui_3434 at 3686.528 kb on + strand, within Dsui_3434 at 3686.678 kb on + strand at 3686.698 kb on + strand at 3686.723 kb on + strand at 3686.763 kb on - strand at 3686.806 kb on + strand at 3686.853 kb on - strand at 3687.015 kb on - strand at 3687.059 kb on + strand at 3687.188 kb on - strand at 3687.190 kb on - strand at 3687.190 kb on - strand at 3687.198 kb on - strand at 3687.200 kb on - strand at 3687.210 kb on - strand at 3687.217 kb on + strand at 3687.227 kb on + strand at 3687.227 kb on + strand at 3687.241 kb on + strand at 3687.249 kb on - strand at 3687.249 kb on - strand at 3687.284 kb on - strand at 3687.288 kb on + strand at 3687.288 kb on + strand at 3687.288 kb on + strand at 3687.288 kb on + strand at 3687.291 kb on - strand at 3687.291 kb on - strand at 3687.296 kb on - strand at 3687.296 kb on - strand at 3687.296 kb on - strand at 3687.296 kb on - strand at 3687.296 kb on - strand at 3687.298 kb on + strand at 3687.298 kb on + strand at 3687.301 kb on - strand at 3687.303 kb on + strand at 3687.306 kb on - strand at 3687.306 kb on - strand at 3687.306 kb on - strand at 3687.306 kb on - strand at 3687.306 kb on - strand at 3687.306 kb on - strand at 3687.306 kb on - strand at 3687.334 kb on + strand at 3687.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 3,684,955 + Dsui_3432 0.40 -0.2 3,685,030 + Dsui_3432 0.46 +1.0 3,685,038 - -0.3 3,685,049 - +1.4 3,685,194 + Dsui_3432 0.59 +1.2 3,685,212 - +1.0 3,685,246 + Dsui_3432 0.63 -0.7 3,685,251 + Dsui_3432 0.63 -0.2 3,685,275 + Dsui_3432 0.65 -0.5 3,685,283 - +1.0 3,685,283 - Dsui_3432 0.65 +0.4 3,685,396 - Dsui_3432 0.74 -0.3 3,685,435 + Dsui_3432 0.77 +0.3 3,685,680 + +2.0 3,685,688 - -1.7 3,685,763 + +0.8 3,686,050 - Dsui_3433 0.40 +0.9 3,686,124 - Dsui_3433 0.54 -0.3 3,686,217 - +0.4 3,686,226 + +1.0 3,686,288 - +1.0 3,686,294 - +0.4 3,686,389 - +0.6 3,686,404 - +0.7 3,686,467 + Dsui_3434 0.12 +0.8 3,686,528 + Dsui_3434 0.35 -1.8 3,686,678 + -0.4 3,686,698 + +1.4 3,686,723 + -0.1 3,686,763 - +0.2 3,686,806 + +0.4 3,686,853 - -1.4 3,687,015 - +2.0 3,687,059 + -0.1 3,687,188 - +0.6 3,687,190 - -0.0 3,687,190 - +0.4 3,687,198 - +0.2 3,687,200 - +1.3 3,687,210 - +1.1 3,687,217 + +0.8 3,687,227 + -0.0 3,687,227 + -1.3 3,687,241 + +1.0 3,687,249 - +1.0 3,687,249 - +0.4 3,687,284 - +0.3 3,687,288 + +0.4 3,687,288 + +0.3 3,687,288 + +0.1 3,687,288 + -0.4 3,687,291 - +0.6 3,687,291 - +0.7 3,687,296 - +0.5 3,687,296 - -0.9 3,687,296 - -0.5 3,687,296 - +0.5 3,687,296 - -0.3 3,687,298 + -0.3 3,687,298 + +1.7 3,687,301 - +0.6 3,687,303 + -0.6 3,687,306 - +0.4 3,687,306 - -0.9 3,687,306 - -0.0 3,687,306 - +0.1 3,687,306 - +0.4 3,687,306 - +2.0 3,687,306 - -0.6 3,687,334 + +2.0 3,687,340 - +0.6
Or see this region's nucleotide sequence