Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3363 and Dsui_3364 are separated by 98 nucleotides Dsui_3364 and Dsui_3365 are separated by 251 nucleotides Dsui_3365 and Dsui_3366 are separated by 120 nucleotides
Dsui_3363: Dsui_3363 - hypothetical protein, at 3,602,590 to 3,603,486
_3363
Dsui_3364: Dsui_3364 - alanine--tRNA ligase, at 3,603,585 to 3,606,278
_3364
Dsui_3365: Dsui_3365 - hypothetical protein, at 3,606,530 to 3,606,913
_3365
Dsui_3366: Dsui_3366 - glycerophosphoryl diester phosphodiesterase, at 3,607,034 to 3,607,840
_3366
Position (kb)
3603
3604
3605
3606
3607 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3602.588 kb on + strand at 3602.646 kb on - strand at 3602.653 kb on + strand at 3602.653 kb on + strand at 3602.661 kb on - strand at 3602.661 kb on - strand at 3602.685 kb on - strand, within Dsui_3363 at 3602.700 kb on + strand, within Dsui_3363 at 3602.705 kb on + strand, within Dsui_3363 at 3602.705 kb on + strand, within Dsui_3363 at 3602.709 kb on + strand, within Dsui_3363 at 3602.710 kb on + strand, within Dsui_3363 at 3602.722 kb on - strand, within Dsui_3363 at 3602.753 kb on - strand, within Dsui_3363 at 3602.760 kb on + strand, within Dsui_3363 at 3602.768 kb on + strand, within Dsui_3363 at 3602.768 kb on + strand, within Dsui_3363 at 3602.768 kb on + strand, within Dsui_3363 at 3602.768 kb on - strand, within Dsui_3363 at 3602.776 kb on - strand, within Dsui_3363 at 3602.778 kb on - strand, within Dsui_3363 at 3602.820 kb on - strand, within Dsui_3363 at 3602.893 kb on + strand, within Dsui_3363 at 3602.914 kb on + strand, within Dsui_3363 at 3602.922 kb on + strand, within Dsui_3363 at 3602.922 kb on + strand, within Dsui_3363 at 3602.922 kb on + strand, within Dsui_3363 at 3602.930 kb on - strand, within Dsui_3363 at 3602.930 kb on - strand, within Dsui_3363 at 3602.930 kb on - strand, within Dsui_3363 at 3602.945 kb on - strand, within Dsui_3363 at 3602.971 kb on + strand, within Dsui_3363 at 3602.991 kb on - strand, within Dsui_3363 at 3603.034 kb on + strand, within Dsui_3363 at 3603.042 kb on - strand, within Dsui_3363 at 3603.042 kb on - strand, within Dsui_3363 at 3603.042 kb on - strand, within Dsui_3363 at 3603.050 kb on - strand, within Dsui_3363 at 3603.085 kb on + strand, within Dsui_3363 at 3603.095 kb on + strand, within Dsui_3363 at 3603.095 kb on - strand, within Dsui_3363 at 3603.102 kb on + strand, within Dsui_3363 at 3603.116 kb on + strand, within Dsui_3363 at 3603.189 kb on - strand, within Dsui_3363 at 3603.246 kb on - strand, within Dsui_3363 at 3603.266 kb on + strand, within Dsui_3363 at 3603.291 kb on - strand, within Dsui_3363 at 3603.305 kb on + strand, within Dsui_3363 at 3603.305 kb on + strand, within Dsui_3363 at 3603.305 kb on + strand, within Dsui_3363 at 3603.310 kb on + strand, within Dsui_3363 at 3603.313 kb on - strand, within Dsui_3363 at 3603.313 kb on - strand, within Dsui_3363 at 3603.319 kb on + strand, within Dsui_3363 at 3603.337 kb on + strand, within Dsui_3363 at 3603.338 kb on + strand, within Dsui_3363 at 3603.366 kb on + strand, within Dsui_3363 at 3603.408 kb on + strand at 3603.444 kb on + strand at 3603.444 kb on + strand at 3603.469 kb on - strand at 3603.486 kb on + strand at 3603.486 kb on + strand at 3603.489 kb on - strand at 3603.493 kb on + strand at 3603.493 kb on + strand at 3603.493 kb on + strand at 3603.501 kb on - strand at 3603.501 kb on - strand at 3603.542 kb on + strand at 3603.583 kb on + strand at 3603.591 kb on - strand at 3603.591 kb on - strand at 3603.591 kb on - strand at 3606.362 kb on - strand at 3606.402 kb on + strand at 3606.656 kb on + strand at 3606.702 kb on + strand at 3606.736 kb on - strand at 3606.737 kb on - strand, within Dsui_3365 at 3606.810 kb on - strand at 3606.837 kb on - strand at 3606.866 kb on - strand, within Dsui_3365 at 3606.866 kb on - strand at 3606.966 kb on - strand at 3607.017 kb on - strand at 3607.141 kb on - strand, within Dsui_3366 at 3607.141 kb on - strand, within Dsui_3366 at 3607.187 kb on - strand, within Dsui_3366
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 3,602,588 + -0.0 3,602,646 - -0.1 3,602,653 + +0.4 3,602,653 + +0.1 3,602,661 - +0.1 3,602,661 - -0.2 3,602,685 - Dsui_3363 0.11 -0.6 3,602,700 + Dsui_3363 0.12 -1.2 3,602,705 + Dsui_3363 0.13 +2.0 3,602,705 + Dsui_3363 0.13 +0.4 3,602,709 + Dsui_3363 0.13 -0.1 3,602,710 + Dsui_3363 0.13 +0.1 3,602,722 - Dsui_3363 0.15 -0.1 3,602,753 - Dsui_3363 0.18 -0.2 3,602,760 + Dsui_3363 0.19 -0.0 3,602,768 + Dsui_3363 0.20 -0.0 3,602,768 + Dsui_3363 0.20 -1.4 3,602,768 + Dsui_3363 0.20 -0.1 3,602,768 - Dsui_3363 0.20 -0.1 3,602,776 - Dsui_3363 0.21 -0.1 3,602,778 - Dsui_3363 0.21 +0.0 3,602,820 - Dsui_3363 0.26 +0.5 3,602,893 + Dsui_3363 0.34 -0.7 3,602,914 + Dsui_3363 0.36 -0.8 3,602,922 + Dsui_3363 0.37 -1.2 3,602,922 + Dsui_3363 0.37 -1.2 3,602,922 + Dsui_3363 0.37 -0.3 3,602,930 - Dsui_3363 0.38 -0.1 3,602,930 - Dsui_3363 0.38 -0.1 3,602,930 - Dsui_3363 0.38 -0.2 3,602,945 - Dsui_3363 0.40 +0.1 3,602,971 + Dsui_3363 0.42 -0.1 3,602,991 - Dsui_3363 0.45 +0.2 3,603,034 + Dsui_3363 0.49 -0.6 3,603,042 - Dsui_3363 0.50 +0.5 3,603,042 - Dsui_3363 0.50 +1.2 3,603,042 - Dsui_3363 0.50 -0.3 3,603,050 - Dsui_3363 0.51 +0.5 3,603,085 + Dsui_3363 0.55 -0.1 3,603,095 + Dsui_3363 0.56 +0.1 3,603,095 - Dsui_3363 0.56 +0.6 3,603,102 + Dsui_3363 0.57 -0.7 3,603,116 + Dsui_3363 0.59 +0.0 3,603,189 - Dsui_3363 0.67 -0.4 3,603,246 - Dsui_3363 0.73 -0.2 3,603,266 + Dsui_3363 0.75 +0.0 3,603,291 - Dsui_3363 0.78 -0.1 3,603,305 + Dsui_3363 0.80 +1.4 3,603,305 + Dsui_3363 0.80 +0.2 3,603,305 + Dsui_3363 0.80 +1.0 3,603,310 + Dsui_3363 0.80 +0.5 3,603,313 - Dsui_3363 0.81 +0.1 3,603,313 - Dsui_3363 0.81 +0.5 3,603,319 + Dsui_3363 0.81 -0.4 3,603,337 + Dsui_3363 0.83 -0.3 3,603,338 + Dsui_3363 0.83 +0.2 3,603,366 + Dsui_3363 0.87 -0.3 3,603,408 + +0.7 3,603,444 + -0.1 3,603,444 + -0.3 3,603,469 - +0.1 3,603,486 + +0.2 3,603,486 + +0.2 3,603,489 - +0.2 3,603,493 + +0.4 3,603,493 + +0.2 3,603,493 + +2.0 3,603,501 - +0.1 3,603,501 - -0.1 3,603,542 + +0.3 3,603,583 + -0.4 3,603,591 - -0.3 3,603,591 - +0.1 3,603,591 - -0.2 3,606,362 - +0.7 3,606,402 + -0.0 3,606,656 + +1.0 3,606,702 + +1.0 3,606,736 - +2.0 3,606,737 - Dsui_3365 0.54 +0.3 3,606,810 - +2.0 3,606,837 - +1.0 3,606,866 - Dsui_3365 0.88 -0.3 3,606,866 - +0.4 3,606,966 - +3.6 3,607,017 - -0.8 3,607,141 - Dsui_3366 0.13 -1.2 3,607,141 - Dsui_3366 0.13 -0.1 3,607,187 - Dsui_3366 0.19 -0.1
Or see this region's nucleotide sequence