Strain Fitness in Dechlorosoma suillum PS around Dsui_2936

Experiment: rich media with sodium chlorite 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2935 and Dsui_2936 overlap by 1 nucleotidesDsui_2936 and Dsui_2937 are separated by 0 nucleotides Dsui_2935: Dsui_2935 - NAD/NADP transhydrogenase alpha subunit, at 3,140,200 to 3,141,327 _2935 Dsui_2936: Dsui_2936 - hypothetical protein, at 3,141,327 to 3,141,629 _2936 Dsui_2937: Dsui_2937 - NAD/NADP transhydrogenase beta subunit, at 3,141,630 to 3,143,000 _2937 Position (kb) 3141 3142Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3140.427 kb on + strand, within Dsui_2935at 3140.462 kb on + strand, within Dsui_2935at 3140.467 kb on + strandat 3140.481 kb on + strandat 3140.523 kb on - strandat 3140.529 kb on + strand, within Dsui_2935at 3140.546 kb on + strandat 3140.605 kb on - strand, within Dsui_2935at 3140.634 kb on + strandat 3141.020 kb on - strandat 3141.131 kb on + strandat 3141.334 kb on + strandat 3141.366 kb on + strand, within Dsui_2936at 3141.398 kb on - strandat 3141.405 kb on + strand, within Dsui_2936at 3141.474 kb on + strand, within Dsui_2936at 3141.692 kb on + strandat 3141.706 kb on - strandat 3141.780 kb on - strand, within Dsui_2937at 3141.813 kb on + strand, within Dsui_2937at 3141.819 kb on + strand, within Dsui_2937at 3141.825 kb on + strand, within Dsui_2937at 3141.844 kb on + strand, within Dsui_2937at 3141.882 kb on + strand, within Dsui_2937at 3142.049 kb on - strandat 3142.052 kb on + strand, within Dsui_2937at 3142.053 kb on + strand, within Dsui_2937at 3142.109 kb on + strand, within Dsui_2937at 3142.110 kb on + strand, within Dsui_2937at 3142.176 kb on - strand, within Dsui_2937at 3142.213 kb on + strand, within Dsui_2937at 3142.306 kb on + strand, within Dsui_2937at 3142.311 kb on + strand, within Dsui_2937at 3142.321 kb on + strand, within Dsui_2937at 3142.321 kb on + strand, within Dsui_2937at 3142.329 kb on - strandat 3142.387 kb on - strand, within Dsui_2937at 3142.392 kb on + strand, within Dsui_2937at 3142.392 kb on + strand, within Dsui_2937at 3142.392 kb on + strand, within Dsui_2937at 3142.400 kb on - strandat 3142.557 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM
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3,140,427 + Dsui_2935 0.20 +0.3
3,140,462 + Dsui_2935 0.23 -0.1
3,140,467 + +0.3
3,140,481 + -1.2
3,140,523 - +1.9
3,140,529 + Dsui_2935 0.29 +0.6
3,140,546 + +2.9
3,140,605 - Dsui_2935 0.36 +0.5
3,140,634 + +0.9
3,141,020 - +1.9
3,141,131 + -0.4
3,141,334 + +1.9
3,141,366 + Dsui_2936 0.13 +0.1
3,141,398 - +1.9
3,141,405 + Dsui_2936 0.26 +0.4
3,141,474 + Dsui_2936 0.49 +0.3
3,141,692 + -1.0
3,141,706 - +0.1
3,141,780 - Dsui_2937 0.11 -1.1
3,141,813 + Dsui_2937 0.13 +0.4
3,141,819 + Dsui_2937 0.14 -0.4
3,141,825 + Dsui_2937 0.14 +0.3
3,141,844 + Dsui_2937 0.16 -0.4
3,141,882 + Dsui_2937 0.18 -0.4
3,142,049 - -0.9
3,142,052 + Dsui_2937 0.31 +0.5
3,142,053 + Dsui_2937 0.31 -0.5
3,142,109 + Dsui_2937 0.35 -0.7
3,142,110 + Dsui_2937 0.35 -0.8
3,142,176 - Dsui_2937 0.40 +1.2
3,142,213 + Dsui_2937 0.43 +0.4
3,142,306 + Dsui_2937 0.49 -0.2
3,142,311 + Dsui_2937 0.50 +1.0
3,142,321 + Dsui_2937 0.50 +0.1
3,142,321 + Dsui_2937 0.50 +1.1
3,142,329 - +1.9
3,142,387 - Dsui_2937 0.55 -2.0
3,142,392 + Dsui_2937 0.56 -1.1
3,142,392 + Dsui_2937 0.56 -0.6
3,142,392 + Dsui_2937 0.56 -0.1
3,142,400 - +1.5
3,142,557 - +0.9

Or see this region's nucleotide sequence