Strain Fitness in Dechlorosoma suillum PS around Dsui_2616

Experiment: rich media with sodium chlorite 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2615 and Dsui_2616 overlap by 10 nucleotidesDsui_2616 and Dsui_2617 are separated by 477 nucleotides Dsui_2615: Dsui_2615 - hypothetical protein, at 2,768,053 to 2,769,579 _2615 Dsui_2616: Dsui_2616 - hypothetical protein, at 2,769,570 to 2,769,788 _2616 Dsui_2617: Dsui_2617 - DNA recombination-dependent growth factor C, at 2,770,266 to 2,771,168 _2617 Position (kb) 2769 2770Strain fitness (log2 ratio) -2 -1 0 1 2at 2768.570 kb on + strand, within Dsui_2615at 2768.570 kb on + strand, within Dsui_2615at 2768.586 kb on + strand, within Dsui_2615at 2768.603 kb on + strand, within Dsui_2615at 2768.661 kb on + strand, within Dsui_2615at 2768.674 kb on - strand, within Dsui_2615at 2768.725 kb on + strand, within Dsui_2615at 2768.733 kb on - strand, within Dsui_2615at 2768.751 kb on + strand, within Dsui_2615at 2768.751 kb on + strand, within Dsui_2615at 2768.751 kb on + strand, within Dsui_2615at 2768.824 kb on - strandat 2769.022 kb on - strand, within Dsui_2615at 2769.057 kb on + strand, within Dsui_2615at 2769.144 kb on + strand, within Dsui_2615at 2769.160 kb on + strand, within Dsui_2615at 2769.181 kb on + strand, within Dsui_2615at 2769.189 kb on - strand, within Dsui_2615at 2769.418 kb on + strandat 2769.428 kb on + strandat 2769.428 kb on + strandat 2769.428 kb on + strandat 2769.428 kb on + strandat 2769.428 kb on + strandat 2769.436 kb on - strandat 2769.436 kb on - strandat 2769.443 kb on + strandat 2769.473 kb on - strandat 2769.533 kb on + strandat 2769.533 kb on + strandat 2769.533 kb on + strandat 2769.541 kb on - strandat 2769.541 kb on - strandat 2769.552 kb on + strandat 2769.552 kb on + strandat 2769.652 kb on + strand, within Dsui_2616at 2769.667 kb on + strand, within Dsui_2616at 2769.701 kb on + strand, within Dsui_2616at 2769.763 kb on - strand, within Dsui_2616at 2769.796 kb on - strandat 2769.933 kb on + strandat 2769.983 kb on - strandat 2770.000 kb on - strandat 2770.116 kb on - strandat 2770.142 kb on + strandat 2770.161 kb on + strandat 2770.206 kb on + strandat 2770.260 kb on - strandat 2770.272 kb on - strandat 2770.340 kb on - strandat 2770.520 kb on + strand, within Dsui_2617

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM
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2,768,570 + Dsui_2615 0.34 -1.4
2,768,570 + Dsui_2615 0.34 -1.4
2,768,586 + Dsui_2615 0.35 -1.0
2,768,603 + Dsui_2615 0.36 -0.3
2,768,661 + Dsui_2615 0.40 -0.7
2,768,674 - Dsui_2615 0.41 -0.4
2,768,725 + Dsui_2615 0.44 -0.2
2,768,733 - Dsui_2615 0.45 -1.4
2,768,751 + Dsui_2615 0.46 -0.0
2,768,751 + Dsui_2615 0.46 -0.9
2,768,751 + Dsui_2615 0.46 -0.6
2,768,824 - -0.4
2,769,022 - Dsui_2615 0.63 -0.9
2,769,057 + Dsui_2615 0.66 -0.4
2,769,144 + Dsui_2615 0.71 -0.1
2,769,160 + Dsui_2615 0.72 -0.9
2,769,181 + Dsui_2615 0.74 +0.6
2,769,189 - Dsui_2615 0.74 -0.1
2,769,418 + +1.1
2,769,428 + -1.0
2,769,428 + -0.8
2,769,428 + -1.2
2,769,428 + -0.9
2,769,428 + +1.1
2,769,436 - +0.4
2,769,436 - -0.7
2,769,443 + -1.3
2,769,473 - -0.7
2,769,533 + +0.1
2,769,533 + +0.6
2,769,533 + +0.1
2,769,541 - +2.1
2,769,541 - +0.8
2,769,552 + +0.6
2,769,552 + +0.2
2,769,652 + Dsui_2616 0.37 -0.7
2,769,667 + Dsui_2616 0.44 -0.4
2,769,701 + Dsui_2616 0.60 +0.3
2,769,763 - Dsui_2616 0.88 +0.0
2,769,796 - -1.3
2,769,933 + -0.6
2,769,983 - -1.1
2,770,000 - -0.5
2,770,116 - +0.7
2,770,142 + -1.0
2,770,161 + -0.1
2,770,206 + -1.9
2,770,260 - +2.5
2,770,272 - -0.9
2,770,340 - -0.7
2,770,520 + Dsui_2617 0.28 -1.4

Or see this region's nucleotide sequence