Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2613 and Dsui_2614 are separated by 48 nucleotides Dsui_2614 and Dsui_2615 overlap by 4 nucleotides
Dsui_2613: Dsui_2613 - integrating conjugative element protein, PFL_4669 family, at 2,766,194 to 2,767,207
_2613
Dsui_2614: Dsui_2614 - hypothetical protein, at 2,767,256 to 2,768,056
_2614
Dsui_2615: Dsui_2615 - hypothetical protein, at 2,768,053 to 2,769,579
_2615
Position (kb)
2767
2768
2769 Strain fitness (log2 ratio)
-2
-1
0
1 at 2766.276 kb on + strand at 2766.415 kb on + strand, within Dsui_2613 at 2766.423 kb on - strand, within Dsui_2613 at 2766.423 kb on - strand, within Dsui_2613 at 2766.423 kb on - strand, within Dsui_2613 at 2766.512 kb on + strand at 2766.519 kb on - strand, within Dsui_2613 at 2766.563 kb on - strand, within Dsui_2613 at 2766.691 kb on - strand, within Dsui_2613 at 2766.734 kb on - strand, within Dsui_2613 at 2766.797 kb on - strand, within Dsui_2613 at 2766.803 kb on - strand, within Dsui_2613 at 2766.927 kb on + strand, within Dsui_2613 at 2767.067 kb on + strand at 2767.144 kb on + strand at 2767.262 kb on - strand at 2767.597 kb on + strand, within Dsui_2614 at 2767.597 kb on + strand, within Dsui_2614 at 2767.606 kb on - strand, within Dsui_2614 at 2767.716 kb on + strand, within Dsui_2614 at 2767.764 kb on - strand, within Dsui_2614 at 2767.948 kb on - strand, within Dsui_2614 at 2767.985 kb on + strand at 2768.093 kb on + strand at 2768.185 kb on - strand at 2768.187 kb on + strand at 2768.240 kb on + strand, within Dsui_2615 at 2768.247 kb on - strand, within Dsui_2615 at 2768.247 kb on - strand, within Dsui_2615 at 2768.300 kb on + strand at 2768.467 kb on + strand, within Dsui_2615 at 2768.516 kb on + strand, within Dsui_2615 at 2768.546 kb on + strand, within Dsui_2615 at 2768.570 kb on + strand, within Dsui_2615 at 2768.570 kb on + strand, within Dsui_2615 at 2768.586 kb on + strand, within Dsui_2615 at 2768.603 kb on + strand, within Dsui_2615 at 2768.661 kb on + strand, within Dsui_2615 at 2768.674 kb on - strand, within Dsui_2615 at 2768.725 kb on + strand, within Dsui_2615 at 2768.733 kb on - strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.751 kb on + strand, within Dsui_2615 at 2768.824 kb on - strand at 2769.022 kb on - strand, within Dsui_2615
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 2,766,276 + +0.1 2,766,415 + Dsui_2613 0.22 +0.8 2,766,423 - Dsui_2613 0.23 -0.6 2,766,423 - Dsui_2613 0.23 +0.2 2,766,423 - Dsui_2613 0.23 +0.1 2,766,512 + +0.1 2,766,519 - Dsui_2613 0.32 -0.3 2,766,563 - Dsui_2613 0.36 -0.7 2,766,691 - Dsui_2613 0.49 +0.7 2,766,734 - Dsui_2613 0.53 -0.7 2,766,797 - Dsui_2613 0.59 -0.9 2,766,803 - Dsui_2613 0.60 -1.5 2,766,927 + Dsui_2613 0.72 +0.1 2,767,067 + -0.9 2,767,144 + -2.4 2,767,262 - +0.1 2,767,597 + Dsui_2614 0.43 +0.1 2,767,597 + Dsui_2614 0.43 +0.1 2,767,606 - Dsui_2614 0.44 -0.8 2,767,716 + Dsui_2614 0.57 -1.0 2,767,764 - Dsui_2614 0.63 -0.8 2,767,948 - Dsui_2614 0.86 -1.6 2,767,985 + +0.6 2,768,093 + -0.4 2,768,185 - -0.5 2,768,187 + -0.7 2,768,240 + Dsui_2615 0.12 -0.1 2,768,247 - Dsui_2615 0.13 +0.6 2,768,247 - Dsui_2615 0.13 -0.3 2,768,300 + +1.1 2,768,467 + Dsui_2615 0.27 +1.0 2,768,516 + Dsui_2615 0.30 -0.0 2,768,546 + Dsui_2615 0.32 -0.7 2,768,570 + Dsui_2615 0.34 -1.4 2,768,570 + Dsui_2615 0.34 -1.4 2,768,586 + Dsui_2615 0.35 -1.0 2,768,603 + Dsui_2615 0.36 -0.3 2,768,661 + Dsui_2615 0.40 -0.7 2,768,674 - Dsui_2615 0.41 -0.4 2,768,725 + Dsui_2615 0.44 -0.2 2,768,733 - Dsui_2615 0.45 -1.4 2,768,751 + Dsui_2615 0.46 -0.0 2,768,751 + Dsui_2615 0.46 -0.9 2,768,751 + Dsui_2615 0.46 -0.6 2,768,824 - -0.4 2,769,022 - Dsui_2615 0.63 -0.9
Or see this region's nucleotide sequence