Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2516 and Dsui_2517 overlap by 23 nucleotides Dsui_2517 and Dsui_2518 are separated by 119 nucleotides Dsui_2518 and Dsui_2519 are separated by 45 nucleotides
Dsui_2516: Dsui_2516 - putative membrane protein, at 2,666,727 to 2,667,992
_2516
Dsui_2517: Dsui_2517 - transposase, at 2,667,970 to 2,668,926
_2517
Dsui_2518: Dsui_2518 - hypothetical protein, at 2,669,046 to 2,669,519
_2518
Dsui_2519: Dsui_2519 - methyl-accepting chemotaxis protein, at 2,669,565 to 2,671,214
_2519
Position (kb)
2667
2668
2669 Strain fitness (log2 ratio)
-1
0
1
2 at 2667.184 kb on + strand at 2667.252 kb on - strand, within Dsui_2516 at 2667.319 kb on + strand, within Dsui_2516 at 2667.326 kb on - strand, within Dsui_2516 at 2667.326 kb on - strand, within Dsui_2516 at 2667.326 kb on - strand, within Dsui_2516 at 2667.355 kb on - strand, within Dsui_2516 at 2667.369 kb on + strand, within Dsui_2516 at 2667.380 kb on + strand, within Dsui_2516 at 2667.512 kb on - strand at 2667.719 kb on + strand, within Dsui_2516 at 2669.130 kb on + strand, within Dsui_2518 at 2669.156 kb on + strand, within Dsui_2518 at 2669.220 kb on - strand, within Dsui_2518 at 2669.234 kb on - strand, within Dsui_2518 at 2669.258 kb on + strand at 2669.386 kb on - strand, within Dsui_2518 at 2669.403 kb on + strand, within Dsui_2518 at 2669.692 kb on - strand at 2669.806 kb on + strand at 2669.893 kb on + strand, within Dsui_2519 at 2669.901 kb on - strand, within Dsui_2519
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 2,667,184 + +2.1 2,667,252 - Dsui_2516 0.41 -0.2 2,667,319 + Dsui_2516 0.47 +0.8 2,667,326 - Dsui_2516 0.47 +0.4 2,667,326 - Dsui_2516 0.47 -0.2 2,667,326 - Dsui_2516 0.47 +0.5 2,667,355 - Dsui_2516 0.50 +0.7 2,667,369 + Dsui_2516 0.51 -0.5 2,667,380 + Dsui_2516 0.52 +0.8 2,667,512 - +0.3 2,667,719 + Dsui_2516 0.78 -1.3 2,669,130 + Dsui_2518 0.18 -0.2 2,669,156 + Dsui_2518 0.23 +0.3 2,669,220 - Dsui_2518 0.37 +0.2 2,669,234 - Dsui_2518 0.40 -0.1 2,669,258 + -0.7 2,669,386 - Dsui_2518 0.72 +0.3 2,669,403 + Dsui_2518 0.75 -0.5 2,669,692 - +0.0 2,669,806 + +2.1 2,669,893 + Dsui_2519 0.20 +0.5 2,669,901 - Dsui_2519 0.20 -1.4
Or see this region's nucleotide sequence