Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2470 and Dsui_2471 are separated by 0 nucleotides Dsui_2471 and Dsui_2472 are separated by 81 nucleotides Dsui_2472 and Dsui_2473 are separated by 52 nucleotides Dsui_2473 and Dsui_2474 are separated by 16 nucleotides Dsui_2474 and Dsui_2475 are separated by 48 nucleotides Dsui_2475 and Dsui_2476 are separated by 138 nucleotides Dsui_2476 and Dsui_2477 are separated by 70 nucleotides Dsui_2477 and Dsui_2478 are separated by 17 nucleotides Dsui_2478 and Dsui_2479 overlap by 4 nucleotides
Dsui_2470: Dsui_2470 - excinuclease ABC, C subunit, at 2,626,359 to 2,628,209
_2470
Dsui_2471: Dsui_2471 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 2,628,210 to 2,628,785
_2471
Dsui_2472: Dsui_2472 - tRNA-Gly, at 2,628,867 to 2,628,942
_2472
Dsui_2473: Dsui_2473 - tRNA-Cys, at 2,628,995 to 2,629,068
_2473
Dsui_2474: Dsui_2474 - tRNA-Gly, at 2,629,085 to 2,629,160
_2474
Dsui_2475: Dsui_2475 - tRNA-Gly, at 2,629,209 to 2,629,284
_2475
Dsui_2476: Dsui_2476 - hypothetical protein, at 2,629,423 to 2,629,626
_2476
Dsui_2477: Dsui_2477 - tRNA-Leu, at 2,629,697 to 2,629,781
_2477
Dsui_2478: Dsui_2478 - hypothetical protein, at 2,629,799 to 2,630,239
_2478
Dsui_2479: Dsui_2479 - hypothetical protein, at 2,630,236 to 2,630,511
_2479
Position (kb)
2629
2630 Strain fitness (log2 ratio)
-1
0
1 at 2628.799 kb on + strand at 2628.800 kb on + strand at 2628.802 kb on - strand at 2628.807 kb on - strand at 2629.161 kb on + strand at 2629.175 kb on + strand at 2629.328 kb on + strand at 2629.394 kb on - strand at 2629.490 kb on + strand, within Dsui_2476 at 2629.653 kb on + strand at 2629.779 kb on + strand at 2629.814 kb on - strand at 2629.818 kb on + strand at 2629.852 kb on - strand, within Dsui_2478 at 2629.888 kb on - strand, within Dsui_2478 at 2629.902 kb on - strand, within Dsui_2478 at 2629.907 kb on - strand, within Dsui_2478 at 2629.944 kb on + strand, within Dsui_2478 at 2629.955 kb on + strand, within Dsui_2478 at 2630.021 kb on - strand, within Dsui_2478 at 2630.228 kb on + strand at 2630.253 kb on + strand at 2630.267 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 2,628,799 + +0.3 2,628,800 + -0.0 2,628,802 - +0.0 2,628,807 - +0.8 2,629,161 + +0.0 2,629,175 + +0.0 2,629,328 + +1.1 2,629,394 - -0.1 2,629,490 + Dsui_2476 0.33 +0.9 2,629,653 + +0.6 2,629,779 + -0.0 2,629,814 - -0.1 2,629,818 + +0.3 2,629,852 - Dsui_2478 0.12 -0.6 2,629,888 - Dsui_2478 0.20 -0.2 2,629,902 - Dsui_2478 0.23 -0.2 2,629,907 - Dsui_2478 0.24 +0.5 2,629,944 + Dsui_2478 0.33 +0.6 2,629,955 + Dsui_2478 0.35 -0.1 2,630,021 - Dsui_2478 0.50 -0.4 2,630,228 + +0.2 2,630,253 + +1.3 2,630,267 - +1.5
Or see this region's nucleotide sequence