Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2290 and Dsui_2291 overlap by 4 nucleotides Dsui_2291 and Dsui_2292 are separated by 37 nucleotides Dsui_2292 and Dsui_2293 are separated by 156 nucleotides
Dsui_2290: Dsui_2290 - putative paraquat-inducible protein A, at 2,444,968 to 2,445,633
_2290
Dsui_2291: Dsui_2291 - putative paraquat-inducible protein A, at 2,445,630 to 2,446,265
_2291
Dsui_2292: Dsui_2292 - RRM domain-containing RNA-binding protein, at 2,446,303 to 2,446,542
_2292
Dsui_2293: Dsui_2293 - poly(3-hydroxyalkanoate) synthetase, at 2,446,699 to 2,448,483
_2293
Position (kb)
2446
2447 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2445.323 kb on - strand, within Dsui_2290 at 2445.356 kb on - strand at 2445.829 kb on - strand, within Dsui_2291 at 2445.923 kb on - strand, within Dsui_2291 at 2445.975 kb on + strand at 2446.076 kb on + strand at 2446.077 kb on - strand at 2446.094 kb on + strand, within Dsui_2291 at 2446.158 kb on - strand, within Dsui_2291 at 2446.158 kb on - strand, within Dsui_2291 at 2446.158 kb on - strand at 2446.296 kb on - strand at 2446.518 kb on + strand at 2446.584 kb on - strand at 2446.739 kb on + strand at 2446.870 kb on + strand at 2446.879 kb on - strand at 2446.971 kb on - strand at 2447.024 kb on + strand, within Dsui_2293 at 2447.025 kb on - strand at 2447.182 kb on + strand at 2447.276 kb on - strand, within Dsui_2293 at 2447.294 kb on - strand, within Dsui_2293 at 2447.432 kb on - strand, within Dsui_2293 at 2447.508 kb on - strand, within Dsui_2293
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 2,445,323 - Dsui_2290 0.53 -0.0 2,445,356 - +2.6 2,445,829 - Dsui_2291 0.31 +1.0 2,445,923 - Dsui_2291 0.46 +0.1 2,445,975 + +2.0 2,446,076 + +1.0 2,446,077 - +1.0 2,446,094 + Dsui_2291 0.73 -1.2 2,446,158 - Dsui_2291 0.83 +0.8 2,446,158 - Dsui_2291 0.83 -0.0 2,446,158 - +1.0 2,446,296 - -0.2 2,446,518 + +3.0 2,446,584 - +0.7 2,446,739 + +2.0 2,446,870 + +0.7 2,446,879 - +3.0 2,446,971 - -0.0 2,447,024 + Dsui_2293 0.18 -0.5 2,447,025 - +0.2 2,447,182 + +0.4 2,447,276 - Dsui_2293 0.32 +0.4 2,447,294 - Dsui_2293 0.33 +0.3 2,447,432 - Dsui_2293 0.41 +0.6 2,447,508 - Dsui_2293 0.45 +1.0
Or see this region's nucleotide sequence