Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0808 and Dsui_0809 are separated by 116 nucleotides Dsui_0809 and Dsui_0810 are separated by 23 nucleotides
Dsui_0808: Dsui_0808 - K+ transport system, NAD-binding component, at 817,839 to 819,269
_0808
Dsui_0809: Dsui_0809 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 819,386 to 820,642
_0809
Dsui_0810: Dsui_0810 - signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation, at 820,666 to 822,786
_0810
Position (kb) 819
820
821 Strain fitness (log2 ratio) -2
-1
0
1 at 818.391 kb on + strand, within Dsui_0808 at 818.394 kb on - strand, within Dsui_0808 at 818.406 kb on + strand, within Dsui_0808 at 818.411 kb on + strand, within Dsui_0808 at 818.432 kb on + strand, within Dsui_0808 at 818.432 kb on + strand, within Dsui_0808 at 818.435 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.440 kb on - strand, within Dsui_0808 at 818.443 kb on - strand, within Dsui_0808 at 818.445 kb on + strand, within Dsui_0808 at 818.458 kb on - strand, within Dsui_0808 at 818.465 kb on + strand, within Dsui_0808 at 818.511 kb on + strand, within Dsui_0808 at 818.637 kb on + strand, within Dsui_0808 at 818.656 kb on + strand, within Dsui_0808 at 818.682 kb on - strand, within Dsui_0808 at 818.840 kb on - strand, within Dsui_0808 at 818.846 kb on - strand, within Dsui_0808 at 818.884 kb on + strand, within Dsui_0808 at 818.887 kb on - strand, within Dsui_0808 at 818.892 kb on - strand, within Dsui_0808 at 818.902 kb on - strand, within Dsui_0808 at 818.935 kb on + strand, within Dsui_0808 at 818.968 kb on + strand, within Dsui_0808 at 819.076 kb on - strand, within Dsui_0808 at 819.076 kb on - strand, within Dsui_0808 at 819.076 kb on - strand, within Dsui_0808 at 819.128 kb on - strand at 819.132 kb on + strand at 819.137 kb on + strand at 819.145 kb on - strand at 819.210 kb on - strand at 819.274 kb on + strand at 819.290 kb on - strand at 819.293 kb on + strand at 819.326 kb on - strand at 819.358 kb on + strand at 819.369 kb on + strand at 819.384 kb on + strand at 819.414 kb on - strand at 820.675 kb on + strand at 821.337 kb on + strand, within Dsui_0810 at 821.598 kb on + strand, within Dsui_0810
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 818,391 + Dsui_0808 0.39 +0.5 818,394 - Dsui_0808 0.39 -0.5 818,406 + Dsui_0808 0.40 -0.4 818,411 + Dsui_0808 0.40 -0.0 818,432 + Dsui_0808 0.41 -0.4 818,432 + Dsui_0808 0.41 +0.5 818,435 - Dsui_0808 0.42 -0.4 818,440 - Dsui_0808 0.42 +0.6 818,440 - Dsui_0808 0.42 +0.3 818,440 - Dsui_0808 0.42 -0.1 818,440 - Dsui_0808 0.42 +0.2 818,443 - Dsui_0808 0.42 -2.3 818,445 + Dsui_0808 0.42 -0.4 818,458 - Dsui_0808 0.43 +1.0 818,465 + Dsui_0808 0.44 -0.1 818,511 + Dsui_0808 0.47 +1.4 818,637 + Dsui_0808 0.56 -0.6 818,656 + Dsui_0808 0.57 -0.7 818,682 - Dsui_0808 0.59 -0.5 818,840 - Dsui_0808 0.70 +0.7 818,846 - Dsui_0808 0.70 -0.2 818,884 + Dsui_0808 0.73 +0.2 818,887 - Dsui_0808 0.73 -0.7 818,892 - Dsui_0808 0.74 -0.6 818,902 - Dsui_0808 0.74 -0.3 818,935 + Dsui_0808 0.77 -0.8 818,968 + Dsui_0808 0.79 -0.7 819,076 - Dsui_0808 0.86 +0.3 819,076 - Dsui_0808 0.86 -0.2 819,076 - Dsui_0808 0.86 -0.5 819,128 - -0.1 819,132 + +0.6 819,137 + -0.3 819,145 - -0.5 819,210 - +0.9 819,274 + +0.6 819,290 - +0.1 819,293 + -0.2 819,326 - -1.0 819,358 + -0.3 819,369 + -0.6 819,384 + -0.8 819,414 - +0.8 820,675 + -0.1 821,337 + Dsui_0810 0.32 +0.5 821,598 + Dsui_0810 0.44 -1.6
Or see this region's nucleotide sequence