Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0645 and Dsui_0646 are separated by 215 nucleotides Dsui_0646 and Dsui_0647 overlap by 4 nucleotides Dsui_0647 and Dsui_0648 are separated by 22 nucleotides
Dsui_0645: Dsui_0645 - S-adenosylmethionine synthetase, at 639,086 to 640,249
_0645
Dsui_0646: Dsui_0646 - Lauroyl/myristoyl acyltransferase, at 640,465 to 641,355
_0646
Dsui_0647: Dsui_0647 - Lauroyl/myristoyl acyltransferase, at 641,352 to 642,209
_0647
Dsui_0648: Dsui_0648 - acetyltransferase, at 642,232 to 642,753
_0648
Position (kb) 640
641
642 Strain fitness (log2 ratio) -1
0
1
2 at 640.265 kb on - strand at 640.304 kb on + strand at 640.304 kb on + strand at 640.306 kb on - strand at 640.307 kb on - strand at 640.307 kb on - strand at 640.354 kb on + strand at 640.359 kb on + strand at 640.362 kb on - strand at 640.362 kb on - strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.402 kb on + strand at 640.462 kb on + strand at 642.239 kb on + strand at 642.239 kb on + strand at 642.239 kb on + strand at 642.247 kb on - strand at 642.278 kb on + strand at 642.293 kb on - strand, within Dsui_0648 at 642.309 kb on - strand, within Dsui_0648
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 640,265 - +0.1 640,304 + +0.6 640,304 + -0.4 640,306 - +0.2 640,307 - +0.1 640,307 - +0.1 640,354 + -0.1 640,359 + +1.0 640,362 - -0.2 640,362 - -0.5 640,402 + +0.1 640,402 + +1.9 640,402 + -0.2 640,402 + -0.3 640,402 + -0.1 640,462 + +0.0 642,239 + +0.1 642,239 + +0.2 642,239 + +0.1 642,247 - -1.1 642,278 + +0.1 642,293 - Dsui_0648 0.12 -0.5 642,309 - Dsui_0648 0.15 -0.6
Or see this region's nucleotide sequence