Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0414 and Dsui_0415 overlap by 4 nucleotides Dsui_0415 and Dsui_0416 overlap by 1 nucleotides Dsui_0416 and Dsui_0417 are separated by 17 nucleotides
Dsui_0414: Dsui_0414 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 415,150 to 416,208
_0414
Dsui_0415: Dsui_0415 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 416,205 to 417,185
_0415
Dsui_0416: Dsui_0416 - transcriptional regulator, at 417,185 to 417,922
_0416
Dsui_0417: Dsui_0417 - gamma-glutamyltransferase, at 417,940 to 419,529
_0417
Position (kb) 417
418 Strain fitness (log2 ratio) -1
0
1
2
3 at 416.254 kb on + strand at 416.295 kb on - strand at 416.340 kb on + strand, within Dsui_0415 at 416.345 kb on + strand at 416.431 kb on + strand at 416.446 kb on + strand at 416.519 kb on + strand at 416.701 kb on + strand, within Dsui_0415 at 416.701 kb on + strand at 416.752 kb on - strand at 416.885 kb on + strand, within Dsui_0415 at 416.915 kb on - strand, within Dsui_0415 at 416.929 kb on - strand at 416.956 kb on + strand at 416.956 kb on - strand at 417.146 kb on - strand at 417.331 kb on - strand at 417.362 kb on + strand at 417.369 kb on + strand, within Dsui_0416 at 417.428 kb on - strand at 417.645 kb on + strand at 417.744 kb on + strand at 417.865 kb on - strand at 417.913 kb on + strand at 417.999 kb on + strand at 418.002 kb on - strand at 418.087 kb on - strand at 418.558 kb on - strand, within Dsui_0417 at 418.844 kb on + strand at 418.919 kb on + strand, within Dsui_0417
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 416,254 + +2.0 416,295 - -0.5 416,340 + Dsui_0415 0.14 +2.4 416,345 + +2.0 416,431 + +0.4 416,446 + +1.6 416,519 + +1.0 416,701 + Dsui_0415 0.51 +0.1 416,701 + +2.0 416,752 - +1.4 416,885 + Dsui_0415 0.69 +2.0 416,915 - Dsui_0415 0.72 -1.2 416,929 - +3.0 416,956 + +2.0 416,956 - +0.4 417,146 - +1.0 417,331 - +1.2 417,362 + +2.0 417,369 + Dsui_0416 0.25 +0.5 417,428 - +1.0 417,645 + +2.0 417,744 + +1.0 417,865 - +0.6 417,913 + +0.6 417,999 + +0.5 418,002 - -0.9 418,087 - -1.4 418,558 - Dsui_0417 0.39 +1.8 418,844 + -0.4 418,919 + Dsui_0417 0.62 -0.0
Or see this region's nucleotide sequence