Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0366 and Dsui_0367 are separated by 255 nucleotides Dsui_0367 and Dsui_0368 are separated by 49 nucleotides Dsui_0368 and Dsui_0369 are separated by 255 nucleotides Dsui_0369 and Dsui_0370 are separated by 1 nucleotides
Dsui_0366: Dsui_0366 - DNA-directed RNA polymerase, beta subunit, at 364,588 to 368,871
_0366
Dsui_0367: Dsui_0367 - ribosomal protein L7/L12, at 369,127 to 369,501
_0367
Dsui_0368: Dsui_0368 - ribosomal protein L10, at 369,551 to 370,054
_0368
Dsui_0369: Dsui_0369 - ribosomal protein L1, at 370,310 to 371,005
_0369
Dsui_0370: Dsui_0370 - 50S ribosomal protein L11, at 371,007 to 371,438
_0370
Position (kb) 369
370
371 Strain fitness (log2 ratio) -1
0
1 at 369.022 kb on + strand at 369.022 kb on + strand at 369.029 kb on - strand at 369.030 kb on - strand at 369.030 kb on - strand at 369.030 kb on - strand at 369.073 kb on + strand at 370.205 kb on - strand at 370.268 kb on - strand at 370.329 kb on - strand at 370.329 kb on - strand at 370.338 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 369,022 + -1.5 369,022 + -1.6 369,029 - -0.5 369,030 - -0.2 369,030 - -0.6 369,030 - -0.0 369,073 + -1.0 370,205 - -0.3 370,268 - -0.2 370,329 - +0.2 370,329 - -0.5 370,338 - -0.1
Or see this region's nucleotide sequence