Strain Fitness in Dechlorosoma suillum PS around Dsui_0366

Experiment: rich media with sodium chlorite 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0365 and Dsui_0366 are separated by 68 nucleotidesDsui_0366 and Dsui_0367 are separated by 255 nucleotidesDsui_0367 and Dsui_0368 are separated by 49 nucleotides Dsui_0365: Dsui_0365 - DNA-directed RNA polymerase, beta'' subunit, predominant form, at 360,311 to 364,519 _0365 Dsui_0366: Dsui_0366 - DNA-directed RNA polymerase, beta subunit, at 364,588 to 368,871 _0366 Dsui_0367: Dsui_0367 - ribosomal protein L7/L12, at 369,127 to 369,501 _0367 Dsui_0368: Dsui_0368 - ribosomal protein L10, at 369,551 to 370,054 _0368 Position (kb) 364 365 366 367 368 369Strain fitness (log2 ratio) -1 0 1at 364.594 kb on - strandat 364.594 kb on - strandat 369.022 kb on + strandat 369.022 kb on + strandat 369.029 kb on - strandat 369.030 kb on - strandat 369.030 kb on - strandat 369.030 kb on - strandat 369.073 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM
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364,594 - -0.7
364,594 - -0.4
369,022 + -1.5
369,022 + -1.6
369,029 - -0.5
369,030 - -0.2
369,030 - -0.6
369,030 - -0.0
369,073 + -1.0

Or see this region's nucleotide sequence