Experiment: rich media with sodium chlorite 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0210 and Dsui_0211 are separated by 9 nucleotides Dsui_0211 and Dsui_0212 are separated by 57 nucleotides Dsui_0212 and Dsui_0213 overlap by 8 nucleotides Dsui_0213 and Dsui_0214 overlap by 14 nucleotides Dsui_0214 and Dsui_0215 are separated by 2 nucleotides
Dsui_0210: Dsui_0210 - hypothetical protein, at 211,630 to 213,639
_0210
Dsui_0211: Dsui_0211 - hypothetical protein, at 213,649 to 213,831
_0211
Dsui_0212: Dsui_0212 - hypothetical protein, at 213,889 to 214,266
_0212
Dsui_0213: Dsui_0213 - hypothetical protein, at 214,259 to 214,603
_0213
Dsui_0214: Dsui_0214 - TIGR02594 family protein, at 214,590 to 215,081
_0214
Dsui_0215: Dsui_0215 - hypothetical protein, at 215,084 to 215,500
_0215
Position (kb) 213
214
215 Strain fitness (log2 ratio) -1
0
1
2
3 at 212.921 kb on + strand, within Dsui_0210 at 212.921 kb on + strand at 212.929 kb on - strand, within Dsui_0210 at 212.929 kb on - strand, within Dsui_0210 at 212.963 kb on + strand at 212.971 kb on - strand at 212.988 kb on + strand, within Dsui_0210 at 213.197 kb on + strand, within Dsui_0210 at 213.256 kb on - strand, within Dsui_0210 at 213.326 kb on + strand, within Dsui_0210 at 213.350 kb on - strand, within Dsui_0210 at 213.562 kb on + strand at 213.671 kb on + strand, within Dsui_0211 at 213.679 kb on - strand at 213.843 kb on - strand at 213.952 kb on - strand at 213.952 kb on - strand, within Dsui_0212 at 214.242 kb on + strand at 214.242 kb on + strand at 214.284 kb on + strand at 214.301 kb on + strand, within Dsui_0213 at 214.312 kb on - strand at 214.316 kb on + strand, within Dsui_0213 at 214.324 kb on - strand, within Dsui_0213 at 214.324 kb on - strand, within Dsui_0213 at 214.324 kb on - strand at 214.349 kb on - strand at 214.429 kb on - strand at 214.621 kb on + strand at 214.627 kb on + strand at 214.671 kb on + strand at 214.675 kb on + strand, within Dsui_0214 at 214.691 kb on + strand, within Dsui_0214 at 214.816 kb on + strand, within Dsui_0214 at 214.830 kb on + strand, within Dsui_0214 at 214.981 kb on - strand, within Dsui_0214 at 215.216 kb on - strand, within Dsui_0215 at 215.226 kb on - strand, within Dsui_0215
Per-strain Table
Position Strand Gene LocusTag Fraction rich media with sodium chlorite 0.16 mM remove 212,921 + Dsui_0210 0.64 +0.8 212,921 + +1.0 212,929 - Dsui_0210 0.65 -0.8 212,929 - Dsui_0210 0.65 +0.0 212,963 + +0.5 212,971 - +1.6 212,988 + Dsui_0210 0.68 +1.1 213,197 + Dsui_0210 0.78 +0.7 213,256 - Dsui_0210 0.81 -1.1 213,326 + Dsui_0210 0.84 +0.5 213,350 - Dsui_0210 0.86 -1.7 213,562 + +0.2 213,671 + Dsui_0211 0.12 +0.7 213,679 - +0.5 213,843 - +0.1 213,952 - +1.6 213,952 - Dsui_0212 0.17 -0.4 214,242 + +3.4 214,242 + +1.2 214,284 + +1.6 214,301 + Dsui_0213 0.12 -0.3 214,312 - +2.0 214,316 + Dsui_0213 0.17 +1.6 214,324 - Dsui_0213 0.19 -0.3 214,324 - Dsui_0213 0.19 +0.5 214,324 - +1.7 214,349 - +0.5 214,429 - +1.0 214,621 + -0.3 214,627 + +1.5 214,671 + +1.5 214,675 + Dsui_0214 0.17 +0.2 214,691 + Dsui_0214 0.21 +0.2 214,816 + Dsui_0214 0.46 +0.5 214,830 + Dsui_0214 0.49 +0.2 214,981 - Dsui_0214 0.79 -0.1 215,216 - Dsui_0215 0.32 -0.1 215,226 - Dsui_0215 0.34 -0.2
Or see this region's nucleotide sequence