Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1856

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
2,197,639	+				+0.5
2,197,666	-				+0.5
2,197,670	-				-1.3
2,197,741	-				+0.4
2,197,748	+				+0.0
2,197,800	-		Shewana3_1855	0.14	+0.5
2,197,810	-		Shewana3_1855	0.15	-1.0
2,197,836	-		Shewana3_1855	0.18	+0.3
2,197,859	+		Shewana3_1855	0.21	+0.1
2,197,859	+		Shewana3_1855	0.21	-0.9
2,197,867	-		Shewana3_1855	0.22	+0.2
2,197,877	-		Shewana3_1855	0.23	-1.1
2,197,896	+		Shewana3_1855	0.26	+0.7
2,197,901	+		Shewana3_1855	0.26	-1.2
2,197,909	-		Shewana3_1855	0.27	+0.3
2,197,920	+		Shewana3_1855	0.29	-0.1
2,197,920	+		Shewana3_1855	0.29	+0.6
2,197,920	+		Shewana3_1855	0.29	-0.0
2,197,920	+		Shewana3_1855	0.29	-0.0
2,197,920	+		Shewana3_1855	0.29	-0.8
2,197,920	+		Shewana3_1855	0.29	+0.6
2,197,920	+		Shewana3_1855	0.29	-1.1
2,197,920	+		Shewana3_1855	0.29	+0.6
2,197,920	+		Shewana3_1855	0.29	-0.2
2,197,928	-		Shewana3_1855	0.29	+0.6
2,197,928	-		Shewana3_1855	0.29	+0.1
2,197,928	-		Shewana3_1855	0.29	+0.3
2,197,928	-		Shewana3_1855	0.29	+0.3
2,197,928	-		Shewana3_1855	0.29	+0.5
2,197,928	-		Shewana3_1855	0.29	+0.9
2,197,928	-		Shewana3_1855	0.29	+0.4
2,197,928	-		Shewana3_1855	0.29	-1.6
2,197,928	-		Shewana3_1855	0.29	-0.5
2,197,928	-		Shewana3_1855	0.29	-0.6
2,197,928	-		Shewana3_1855	0.29	-0.0
2,197,928	-		Shewana3_1855	0.29	-0.5
2,197,928	-		Shewana3_1855	0.29	-0.1
2,197,935	-		Shewana3_1855	0.30	-0.1
2,197,937	+		Shewana3_1855	0.31	+0.1
2,197,945	-		Shewana3_1855	0.32	-1.9
2,197,968	+		Shewana3_1855	0.34	-1.0
2,198,002	-		Shewana3_1855	0.38	-0.4
2,198,051	-		Shewana3_1855	0.44	+0.2
2,198,090	-		Shewana3_1855	0.49	+1.2
2,198,152	+		Shewana3_1855	0.57	+0.1
2,198,152	+		Shewana3_1855	0.57	-0.6
2,198,152	+		Shewana3_1855	0.57	+0.6
2,198,152	+		Shewana3_1855	0.57	+0.3
2,198,152	+		Shewana3_1855	0.57	-0.9
2,198,152	+		Shewana3_1855	0.57	+0.2
2,198,152	+		Shewana3_1855	0.57	+0.3
2,198,152	+		Shewana3_1855	0.57	+0.8
2,198,152	+		Shewana3_1855	0.57	-0.1
2,198,153	+		Shewana3_1855	0.57	-0.4
2,198,153	+		Shewana3_1855	0.57	+0.2
2,198,153	+		Shewana3_1855	0.57	-1.1
2,198,153	+		Shewana3_1855	0.57	+0.3
2,198,153	+		Shewana3_1855	0.57	+0.5
2,198,153	+		Shewana3_1855	0.57	+0.5
2,198,153	+		Shewana3_1855	0.57	-0.7
2,198,153	+		Shewana3_1855	0.57	-0.7
2,198,153	+		Shewana3_1855	0.57	+1.1
2,198,153	+		Shewana3_1855	0.57	+0.3
2,198,153	+		Shewana3_1855	0.57	-0.5
2,198,153	+		Shewana3_1855	0.57	-0.0
2,198,153	+		Shewana3_1855	0.57	+0.3
2,198,153	+		Shewana3_1855	0.57	+0.3
2,198,153	+		Shewana3_1855	0.57	+1.5
2,198,153	+		Shewana3_1855	0.57	+0.4
2,198,153	+		Shewana3_1855	0.57	+0.1
2,198,153	+		Shewana3_1855	0.57	-1.1
2,198,159	-		Shewana3_1855	0.57	+0.6
2,198,159	-		Shewana3_1855	0.57	+0.3
2,198,159	-		Shewana3_1855	0.57	-0.7
2,198,161	-		Shewana3_1855	0.58	-0.4
2,198,161	-		Shewana3_1855	0.58	+1.4
2,198,161	-		Shewana3_1855	0.58	+0.2
2,198,161	-		Shewana3_1855	0.58	-1.0
2,198,161	-		Shewana3_1855	0.58	+0.7
2,198,161	-		Shewana3_1855	0.58	-0.7
2,198,161	-		Shewana3_1855	0.58	-1.0
2,198,161	-		Shewana3_1855	0.58	-0.9
2,198,161	-		Shewana3_1855	0.58	+0.5
2,198,161	-		Shewana3_1855	0.58	+0.6
2,198,161	-		Shewana3_1855	0.58	+0.2
2,198,161	-		Shewana3_1855	0.58	+1.6
2,198,161	-		Shewana3_1855	0.58	+0.5
2,198,161	-		Shewana3_1855	0.58	-0.1
2,198,161	-		Shewana3_1855	0.58	+0.2
2,198,166	-		Shewana3_1855	0.58	+0.0
2,198,184	+		Shewana3_1855	0.60	-0.4
2,198,184	+		Shewana3_1855	0.60	-0.6
2,198,189	-		Shewana3_1855	0.61	-0.5
2,198,207	+		Shewana3_1855	0.63	-0.4
2,198,220	-		Shewana3_1855	0.65	+0.6
2,198,220	-		Shewana3_1855	0.65	+0.1
2,198,253	+		Shewana3_1855	0.69	+0.0
2,198,255	+		Shewana3_1855	0.69	+0.6
2,198,257	-		Shewana3_1855	0.69	-0.4
2,198,261	-		Shewana3_1855	0.70	-1.6
2,198,261	-				+1.0
2,198,277	+		Shewana3_1855	0.72	+0.5
2,198,277	+		Shewana3_1855	0.72	+0.8
2,198,277	+		Shewana3_1855	0.72	+0.0
2,198,285	-		Shewana3_1855	0.73	+1.1
2,198,285	-		Shewana3_1855	0.73	+0.4
2,198,606	-				+0.7
2,198,639	+		Shewana3_1856	0.19	+0.7
2,198,639	+		Shewana3_1856	0.19	+0.0
2,198,650	+		Shewana3_1856	0.22	+0.5
2,198,650	+		Shewana3_1856	0.22	-0.7
2,198,650	+		Shewana3_1856	0.22	+0.7
2,198,650	+		Shewana3_1856	0.22	-0.9
2,198,650	+		Shewana3_1856	0.22	-0.6
2,198,650	+		Shewana3_1856	0.22	+0.3
2,198,654	-		Shewana3_1856	0.24	-0.2
2,198,658	-		Shewana3_1856	0.25	-1.3
2,198,658	-		Shewana3_1856	0.25	+0.5
2,198,658	-		Shewana3_1856	0.25	+0.6
2,198,664	-		Shewana3_1856	0.27	+0.5
2,198,671	+		Shewana3_1856	0.29	-0.6
2,198,675	-		Shewana3_1856	0.30	-0.3
2,198,679	-		Shewana3_1856	0.31	-0.7
2,198,721	+		Shewana3_1856	0.44	+0.0
2,198,721	+		Shewana3_1856	0.44	+0.5
2,198,721	+		Shewana3_1856	0.44	-0.9
2,198,722	+		Shewana3_1856	0.44	-0.8
2,198,739	+		Shewana3_1856	0.50	+0.3
2,198,743	+		Shewana3_1856	0.51	+0.2
2,198,787	+		Shewana3_1856	0.64	+0.5
2,198,787	+		Shewana3_1856	0.64	+0.5
2,198,808	+		Shewana3_1856	0.71	-0.5
2,198,816	-		Shewana3_1856	0.73	+0.2
2,198,819	+		Shewana3_1856	0.74	+0.1
2,198,820	+		Shewana3_1856	0.74	+0.2
2,198,820	+		Shewana3_1856	0.74	-3.8
2,198,820	+		Shewana3_1856	0.74	+0.6
2,198,820	+		Shewana3_1856	0.74	-0.7
2,198,820	+		Shewana3_1856	0.74	+0.5
2,198,820	+		Shewana3_1856	0.74	-0.4
2,198,820	+		Shewana3_1856	0.74	+0.4
2,198,820	+		Shewana3_1856	0.74	+0.0
2,198,820	+		Shewana3_1856	0.74	+0.2
2,198,820	+		Shewana3_1856	0.74	+0.5
2,198,820	+		Shewana3_1856	0.74	-0.2
2,198,820	+		Shewana3_1856	0.74	+1.2
2,198,828	-		Shewana3_1856	0.77	+0.2
2,198,828	-		Shewana3_1856	0.77	+0.5
2,198,828	-		Shewana3_1856	0.77	-1.6
2,198,828	-		Shewana3_1856	0.77	-0.5
2,198,828	-		Shewana3_1856	0.77	-0.9
2,198,828	-		Shewana3_1856	0.77	+0.9
2,198,828	-		Shewana3_1856	0.77	+0.2
2,198,828	-		Shewana3_1856	0.77	+0.4
2,198,828	-		Shewana3_1856	0.77	-0.9
2,198,828	-		Shewana3_1856	0.77	+0.6
2,198,828	-		Shewana3_1856	0.77	-1.0
2,198,828	-		Shewana3_1856	0.77	-4.2
2,198,832	+		Shewana3_1856	0.78	+0.4
2,198,832	+		Shewana3_1856	0.78	-0.4
2,198,837	+		Shewana3_1856	0.80	-1.3
2,198,840	-		Shewana3_1856	0.80	+0.9
2,198,871	-				+0.3
2,198,885	+				-0.8
2,198,886	+				+0.8
2,198,886	+				-1.1
2,198,886	+				-1.0
2,198,887	-				+0.3
2,198,894	-				+0.4
2,198,894	-				+0.6
2,199,013	+				+0.7
2,199,013	+				-0.5
2,199,021	-				+1.0
2,199,021	-				-1.8
2,199,026	+				-3.6
2,199,027	-				-0.3
2,199,031	+				-0.0
2,199,034	-				+0.2
2,199,034	-				-0.2
2,199,104	+		Shewana3_1857	0.22	+0.4
2,199,104	+		Shewana3_1857	0.22	+1.5
2,199,104	+		Shewana3_1857	0.22	-0.0
2,199,104	+		Shewana3_1857	0.22	+0.2
2,199,107	-		Shewana3_1857	0.22	+0.3
2,199,112	-		Shewana3_1857	0.24	-0.0
2,199,112	-		Shewana3_1857	0.24	-1.4
2,199,112	-		Shewana3_1857	0.24	+0.5
2,199,112	-		Shewana3_1857	0.24	-0.1
2,199,119	+		Shewana3_1857	0.25	+0.9
2,199,127	-		Shewana3_1857	0.28	-0.4
2,199,127	-		Shewana3_1857	0.28	+0.5
2,199,132	-		Shewana3_1857	0.29	-0.6
2,199,137	-		Shewana3_1857	0.30	-0.1
2,199,169	-		Shewana3_1857	0.39	-0.2
2,199,203	+		Shewana3_1857	0.48	-0.8
2,199,203	+		Shewana3_1857	0.48	+0.3
2,199,208	+		Shewana3_1857	0.49	+0.1
2,199,211	-		Shewana3_1857	0.50	-1.0
2,199,224	+		Shewana3_1857	0.53	+0.2
2,199,242	-		Shewana3_1857	0.58	-0.2
2,199,242	-		Shewana3_1857	0.58	-0.1
2,199,242	-		Shewana3_1857	0.58	-0.2
2,199,242	-		Shewana3_1857	0.58	-0.3
2,199,246	+		Shewana3_1857	0.59	-0.1
2,199,254	-		Shewana3_1857	0.61	-0.2
2,199,269	+		Shewana3_1857	0.65	-0.1
2,199,277	-		Shewana3_1857	0.67	+0.9
2,199,290	-		Shewana3_1857	0.70	+0.2
2,199,361	+		Shewana3_1857	0.89	+0.2
2,199,385	+				-0.3
2,199,508	-				+0.2
2,199,508	-				-0.4
2,199,524	+				+0.6
2,199,541	+				-1.3
2,199,570	-				-2.1
2,199,842	-		Shewana3_1858	0.82	-0.6