Strain Fitness in Shewanella amazonensis SB2B around Sama_3639

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
4,286,699	+		Sama_3637	0.58	-1.3
4,286,700	-		Sama_3637	0.58	+0.0
4,286,700	-		Sama_3637	0.58	+0.3
4,286,700	-		Sama_3637	0.58	-0.4
4,286,703	-		Sama_3637	0.58	-0.4
4,286,703	-		Sama_3637	0.58	+1.8
4,286,703	-		Sama_3637	0.58	-0.5
4,286,703	-		Sama_3637	0.58	-0.7
4,286,717	+		Sama_3637	0.59	+0.5
4,286,718	-		Sama_3637	0.59	-0.8
4,286,719	+		Sama_3637	0.60	+0.2
4,286,741	+		Sama_3637	0.61	+0.2
4,286,741	+		Sama_3637	0.61	+0.9
4,286,742	-		Sama_3637	0.61	+0.9
4,286,742	-		Sama_3637	0.61	-0.1
4,286,742	-		Sama_3637	0.61	-0.3
4,286,742	-		Sama_3637	0.61	-0.4
4,286,760	+		Sama_3637	0.62	-0.5
4,286,760	+		Sama_3637	0.62	-0.2
4,286,760	+		Sama_3637	0.62	+0.8
4,286,760	+		Sama_3637	0.62	-0.4
4,286,760	+		Sama_3637	0.62	-1.6
4,286,760	+		Sama_3637	0.62	+0.9
4,286,760	+		Sama_3637	0.62	+0.2
4,286,760	+		Sama_3637	0.62	-2.5
4,286,760	+		Sama_3637	0.62	+0.4
4,286,760	+		Sama_3637	0.62	-0.7
4,286,760	+		Sama_3637	0.62	+0.8
4,286,761	-		Sama_3637	0.62	-1.4
4,286,761	-		Sama_3637	0.62	+0.2
4,286,806	+		Sama_3637	0.66	+0.4
4,286,806	+		Sama_3637	0.66	+0.1
4,286,807	-		Sama_3637	0.66	-1.5
4,286,831	+		Sama_3637	0.67	-0.8
4,286,831	+		Sama_3637	0.67	-0.3
4,286,832	-		Sama_3637	0.67	-0.8
4,286,879	+		Sama_3637	0.71	-1.6
4,286,880	-		Sama_3637	0.71	-1.2
4,286,880	-		Sama_3637	0.71	-0.5
4,286,880	-		Sama_3637	0.71	-1.4
4,286,903	+		Sama_3637	0.72	-0.8
4,286,903	+		Sama_3637	0.72	-0.1
4,286,903	+		Sama_3637	0.72	+1.4
4,286,903	+		Sama_3637	0.72	+0.2
4,286,903	+		Sama_3637	0.72	+0.8
4,286,903	+		Sama_3637	0.72	-1.5
4,286,904	-		Sama_3637	0.72	-0.1
4,286,938	-		Sama_3637	0.75	+0.8
4,286,995	-		Sama_3637	0.79	+0.4
4,287,080	+		Sama_3637	0.85	-0.3
4,287,097	+		Sama_3637	0.86	-0.8
4,287,098	-		Sama_3637	0.86	+0.7
4,287,098	-		Sama_3637	0.86	-0.1
4,287,099	+		Sama_3637	0.86	-0.6
4,287,137	-		Sama_3637	0.89	-2.1
4,287,137	-		Sama_3637	0.89	+1.3
4,287,137	-		Sama_3637	0.89	+1.8
4,287,137	-		Sama_3637	0.89	-0.4
4,287,137	-		Sama_3637	0.89	+0.0
4,287,137	-		Sama_3637	0.89	-0.9
4,287,164	+				-0.5
4,287,165	-				+1.0
4,287,191	+				-0.3
4,287,258	-				-0.2
4,287,303	+				-0.6
4,287,303	+				-0.4
4,287,303	+				-0.2
4,287,303	+				+1.0
4,287,303	+				+0.7
4,287,303	+				+0.2
4,287,303	+				-2.4
4,287,304	-				+0.4
4,287,304	-				-0.4
4,287,304	-				-0.4
4,287,304	-				+0.0
4,287,325	+		Sama_3638	0.10	+0.8
4,287,325	+		Sama_3638	0.10	-1.7
4,287,325	+		Sama_3638	0.10	-0.4
4,287,326	-		Sama_3638	0.11	-0.4
4,287,326	-		Sama_3638	0.11	+0.2
4,287,326	-		Sama_3638	0.11	-0.2
4,287,369	-		Sama_3638	0.30	-0.3
4,287,466	+		Sama_3638	0.73	+1.4
4,287,467	-		Sama_3638	0.73	+1.1
4,287,483	+		Sama_3638	0.80	-0.2
4,287,484	+		Sama_3638	0.81	-1.4
4,287,485	-		Sama_3638	0.81	+0.9
4,287,485	-		Sama_3638	0.81	-0.5
4,287,485	-		Sama_3638	0.81	+0.5
4,287,485	-		Sama_3638	0.81	-1.4
4,287,494	+		Sama_3638	0.85	+0.0
4,287,509	+				-0.2
4,287,509	+				+0.2
4,287,509	+				+0.2
4,287,510	-				+0.2
4,287,510	-				-2.4
4,287,510	-				-1.8
4,287,510	-				-0.2
4,287,510	-				+1.4
4,287,533	+				-0.1
4,287,534	-				+0.2
4,287,534	-				+0.6
4,287,534	-				-1.4
4,287,543	+				-0.2
4,287,543	+				+0.2
4,287,543	+				-0.3
4,287,543	+				-0.1
4,287,543	+				-0.5
4,287,544	-				-0.2
4,287,544	-				-0.2
4,287,564	+				-0.1
4,287,564	+				+0.0
4,287,564	+				-0.0
4,287,564	+				+0.1
4,287,564	+				+0.3
4,287,564	+				-0.4
4,287,564	+				+1.8
4,287,564	+				-0.4
4,287,564	+				-0.2
4,287,564	+				+1.4
4,287,564	+				-0.5
4,287,564	+				+0.6
4,287,564	+				-1.4
4,287,565	-				+0.6
4,287,565	-				+0.4
4,287,565	-				+0.2
4,287,565	-				-1.0
4,287,565	-				-0.1
4,287,565	-				+0.2
4,287,565	-				-0.5
4,287,565	-				+0.4
4,287,565	-				-1.0
4,287,565	-				+0.4
4,287,565	-				-1.1
4,287,565	-				+0.9
4,287,578	+				-0.1
4,287,578	+				-0.2
4,287,578	+				-0.5
4,287,578	+				-2.6
4,287,578	+				+1.1
4,287,578	+				-1.4
4,287,578	+				-0.4
4,287,578	+				-0.1
4,287,579	-				+0.7
4,287,579	-				+0.1
4,287,579	-				-0.1
4,287,579	-				+1.0
4,287,579	-				-0.2
4,287,579	-				+0.1
4,287,579	-				+0.8
4,287,579	-				+0.4
4,287,579	-				-0.3
4,287,629	+				-1.9
4,287,676	+				-0.5
4,287,676	+				+0.4
4,287,676	+				-1.0
4,287,676	+				+1.3
4,287,677	-				+0.3
4,287,677	-				+1.7
4,287,677	-				+0.3
4,287,677	-				+1.3
4,287,677	-				+0.2
4,287,677	-				-1.1
4,287,677	-				-1.1
4,287,677	-				-1.0
4,287,677	-				+0.4
4,287,677	-				+0.1
4,287,677	-				+1.7
4,287,677	-				+0.3
4,287,688	+				-0.4
4,287,688	+				+0.4
4,287,688	+				+0.5
4,287,688	+				+0.3
4,287,689	-				-0.8
4,287,689	-				+1.8
4,287,689	-				+0.9
4,287,689	-				+0.2
4,287,697	+				+0.6
4,287,697	+				-0.5
4,287,698	-				+0.6
4,287,698	-				-0.4
4,287,698	-				+0.2
4,289,549	-				+0.3
4,289,556	-				+0.6
4,289,560	-				+1.0
4,289,560	-				+0.3
4,289,560	-				-0.1
4,289,560	-				+1.1
4,289,560	-				-1.0
4,289,560	-				+0.2
4,289,560	-				-0.6
4,289,560	-				-0.6
4,289,578	-				+2.2
4,289,578	-				-1.1
4,289,578	-				-0.3
4,289,601	-				-0.1
4,289,601	-				-0.5
4,289,633	-				+0.5
4,289,694	-		Sama_3640	0.18	-0.5
4,289,694	-		Sama_3640	0.18	-0.3
4,289,694	-		Sama_3640	0.18	-1.0
4,289,694	-		Sama_3640	0.18	-0.7
4,289,721	-		Sama_3640	0.21	+0.8
4,289,721	-		Sama_3640	0.21	+0.2
4,289,721	-		Sama_3640	0.21	-2.9
4,289,721	-		Sama_3640	0.21	-0.5
4,289,799	-		Sama_3640	0.32	-0.8
4,289,799	-		Sama_3640	0.32	+0.1
4,289,799	-		Sama_3640	0.32	+0.6
4,289,799	-		Sama_3640	0.32	-0.8
4,289,816	-		Sama_3640	0.34	-0.3
4,289,816	-		Sama_3640	0.34	-0.1
4,289,836	-		Sama_3640	0.36	+0.7
4,289,836	-		Sama_3640	0.36	+0.2
4,289,836	-		Sama_3640	0.36	+0.7
4,289,836	-		Sama_3640	0.36	-0.6
4,290,008	-		Sama_3640	0.59	-0.4
4,290,031	-		Sama_3640	0.62	-1.6
4,290,050	-		Sama_3640	0.64	-0.1
4,290,050	-		Sama_3640	0.64	-0.4
4,290,209	-		Sama_3640	0.85	-0.6
4,290,209	-		Sama_3640	0.85	-2.8
4,290,209	-		Sama_3640	0.85	+0.6
4,290,308	-				-1.0
4,290,308	-				-1.0
4,290,308	-				-0.1
4,290,399	+				-0.9
4,290,467	+				-0.8