Strain Fitness in Shewanella amazonensis SB2B around Sama_2537

Experiment: D,L-Lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSama_2535 and Sama_2536 are separated by 5 nucleotidesSama_2536 and Sama_2537 overlap by 1 nucleotidesSama_2537 and Sama_2538 overlap by 8 nucleotides Sama_2535: Sama_2535 - Na(+)-translocating NADH-quinone reductase subunit E (RefSeq), at 3,044,418 to 3,045,026 _2535 Sama_2536: Sama_2536 - Na(+)-translocating NADH-quinone reductase subunit D (RefSeq), at 3,045,032 to 3,045,658 _2536 Sama_2537: Sama_2537 - Na(+)-translocating NADH-quinone reductase subunit C (RefSeq), at 3,045,658 to 3,046,455 _2537 Sama_2538: Sama_2538 - Na(+)-translocating NADH-quinone reductase subunit B (RefSeq), at 3,046,448 to 3,047,647 _2538 Position (kb) 3045 3046 3047Strain fitness (log2 ratio) -1 0 1 2at 3045.064 kb on - strandat 3045.999 kb on + strand, within Sama_2537

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate
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3,045,064 - +2.1
3,045,999 + Sama_2537 0.43 +0.9

Or see this region's nucleotide sequence