Strain Fitness in Shewanella amazonensis SB2B around Sama_1522

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
1,850,536	+				-2.0
1,850,536	+				+0.4
1,850,536	+				-0.3
1,850,536	+				-0.1
1,850,536	+				-2.5
1,850,536	+				+0.3
1,850,537	-				-0.5
1,850,537	-				+0.3
1,850,537	-				+0.2
1,850,540	+				+0.3
1,850,540	+				-1.2
1,850,541	-				-1.3
1,850,541	-				-0.0
1,850,541	-				+0.8
1,850,541	-				+0.3
1,850,546	+				-0.8
1,850,588	+				+1.6
1,850,595	+				+0.3
1,850,595	+				-1.0
1,850,607	+				-0.0
1,850,607	+				-0.5
1,850,607	+				-1.0
1,850,607	+				-0.0
1,850,607	+				+0.4
1,850,608	-				+1.0
1,850,608	-				+1.0
1,850,638	-				+0.7
1,850,638	-				-0.0
1,850,707	+				+0.9
1,850,714	+				-1.3
1,850,714	+				-1.6
1,850,714	+				+0.6
1,850,714	+				+0.8
1,850,714	+				+1.0
1,850,714	+				-0.2
1,850,714	+				-2.3
1,850,746	+		Sama_1521	0.14	-0.2
1,850,747	-		Sama_1521	0.14	-0.1
1,850,757	+		Sama_1521	0.16	+1.7
1,850,774	+		Sama_1521	0.19	-1.9
1,850,774	+		Sama_1521	0.19	+0.5
1,850,775	-		Sama_1521	0.19	-0.1
1,850,776	+		Sama_1521	0.19	-0.9
1,850,906	+		Sama_1521	0.42	+0.3
1,850,906	+		Sama_1521	0.42	-0.8
1,850,909	+		Sama_1521	0.43	-0.3
1,850,909	+		Sama_1521	0.43	-1.8
1,850,909	+		Sama_1521	0.43	-0.5
1,851,032	-		Sama_1521	0.65	-1.0
1,851,118	+		Sama_1521	0.80	-0.6
1,851,155	+		Sama_1521	0.87	+0.6
1,851,155	+		Sama_1521	0.87	+0.2
1,851,155	+		Sama_1521	0.87	-0.3
1,851,155	+		Sama_1521	0.87	+1.0
1,851,156	-		Sama_1521	0.87	-1.0
1,851,156	-		Sama_1521	0.87	-0.0
1,851,210	-				+1.4
1,851,224	+				-0.2
1,851,230	+				-0.7
1,851,230	+				-0.4
1,851,230	+				-0.4
1,851,230	+				-0.6
1,851,230	+				+0.4
1,851,230	+				+0.5
1,851,230	+				+2.5
1,851,230	+				-0.5
1,851,230	+				-0.9
1,851,230	+				-0.0
1,851,231	-				-1.2
1,851,231	-				-0.0
1,851,231	-				-0.8
1,851,231	-				-0.0
1,851,268	+				-1.3
1,851,276	+				-2.3
1,851,277	-				-1.8
1,851,282	+				+0.1
1,851,302	-				-2.8
1,851,399	-				-1.0
1,851,432	-				-4.0
1,851,453	-				-0.6
1,851,459	+				-2.9
1,851,571	+		Sama_1522	0.33	-2.6
1,851,670	-		Sama_1522	0.70	-3.4
1,851,670	-		Sama_1522	0.70	-3.3
1,851,696	+		Sama_1522	0.80	-1.3
1,851,696	+		Sama_1522	0.80	-2.5
1,851,723	-				-3.1
1,851,730	-				-1.9
1,851,769	+				-1.2
1,851,782	+				-1.3
1,851,782	+				-3.3
1,851,782	+				-2.8
1,851,783	-				-1.3
1,851,812	+				-1.8
1,851,812	+				-3.8
1,851,812	+				-1.6
1,851,812	+				-2.3
1,851,812	+				-2.5
1,851,813	-				-1.6
1,851,813	-				-2.5
1,851,813	-				+1.0
1,851,814	+				-2.6
1,851,860	+				-3.3
1,851,861	-				-2.8
1,851,861	-				-1.3
1,851,861	-				-1.0
1,851,864	+				+1.0
1,851,937	+		Sama_1523	0.10	-2.3
1,851,938	-		Sama_1523	0.10	-1.8
1,851,952	+		Sama_1523	0.11	-1.0
1,851,986	+		Sama_1523	0.13	-2.7
1,851,986	+		Sama_1523	0.13	-2.5
1,851,987	-		Sama_1523	0.13	-3.2
1,851,987	-		Sama_1523	0.13	-0.6
1,851,987	-		Sama_1523	0.13	-2.5
1,851,987	-		Sama_1523	0.13	-2.2
1,851,987	-		Sama_1523	0.13	-2.3
1,852,010	+		Sama_1523	0.14	-2.6
1,852,010	+		Sama_1523	0.14	-2.9
1,852,010	+		Sama_1523	0.14	-1.6
1,852,010	+		Sama_1523	0.14	-2.5
1,852,010	+		Sama_1523	0.14	-3.3
1,852,011	-		Sama_1523	0.15	-2.2
1,852,011	-		Sama_1523	0.15	-1.0
1,852,031	-		Sama_1523	0.16	-2.9
1,852,041	-		Sama_1523	0.16	-1.8
1,852,041	-		Sama_1523	0.16	-2.0
1,852,049	-		Sama_1523	0.17	-2.0
1,852,063	+		Sama_1523	0.18	-0.0
1,852,068	+		Sama_1523	0.18	-2.0
1,852,091	+		Sama_1523	0.19	-1.6
1,852,091	+		Sama_1523	0.19	-1.3
1,852,092	-		Sama_1523	0.19	-0.3
1,852,094	+		Sama_1523	0.19	-3.3
1,852,094	+		Sama_1523	0.19	-2.3
1,852,095	-		Sama_1523	0.19	-1.3
1,852,151	+		Sama_1523	0.23	-2.0
1,852,151	+		Sama_1523	0.23	-1.8
1,852,151	+		Sama_1523	0.23	-1.0
1,852,151	+		Sama_1523	0.23	-3.0
1,852,153	+		Sama_1523	0.23	-0.3
1,852,224	+		Sama_1523	0.27	-0.0
1,852,226	+		Sama_1523	0.27	-1.7
1,852,226	+		Sama_1523	0.27	-2.7
1,852,226	+		Sama_1523	0.27	-1.3
1,852,226	+		Sama_1523	0.27	-2.8
1,852,226	+		Sama_1523	0.27	-1.0
1,852,226	+		Sama_1523	0.27	-0.0
1,852,227	-		Sama_1523	0.27	-0.6
1,852,227	-		Sama_1523	0.27	-2.2
1,852,227	-		Sama_1523	0.27	-2.2
1,852,235	-		Sama_1523	0.28	-2.6
1,852,253	+		Sama_1523	0.29	-3.0
1,852,253	+		Sama_1523	0.29	-0.6
1,852,254	-		Sama_1523	0.29	+0.4
1,852,279	+		Sama_1523	0.30	-0.3
1,852,280	-		Sama_1523	0.30	-1.0
1,852,286	+		Sama_1523	0.31	-1.0
1,852,286	+		Sama_1523	0.31	-1.6
1,852,286	+		Sama_1523	0.31	-2.0
1,852,286	+		Sama_1523	0.31	-1.6
1,852,287	-		Sama_1523	0.31	-2.5
1,852,305	-		Sama_1523	0.32	-3.7
1,852,316	-		Sama_1523	0.32	-0.6
1,852,433	+		Sama_1523	0.39	-1.6
1,852,433	+		Sama_1523	0.39	-3.1
1,852,433	+		Sama_1523	0.39	-3.8
1,852,433	+		Sama_1523	0.39	-1.8
1,852,433	+		Sama_1523	0.39	-2.0
1,852,434	-		Sama_1523	0.39	-2.0
1,852,463	-		Sama_1523	0.41	-3.2
1,852,485	-		Sama_1523	0.42	-0.8
1,852,573	-		Sama_1523	0.47	-1.3
1,852,597	-		Sama_1523	0.49	-2.0
1,852,642	+		Sama_1523	0.51	-3.1
1,852,642	+		Sama_1523	0.51	-0.0
1,852,643	-		Sama_1523	0.51	-3.1
1,852,643	-		Sama_1523	0.51	-1.6
1,852,643	-		Sama_1523	0.51	-1.0
1,852,733	+		Sama_1523	0.57	-0.6
1,852,734	-		Sama_1523	0.57	-3.2