Strain Fitness in Shewanella amazonensis SB2B around Sama_1027

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
1,241,873	+		Sama_1026	0.52	-0.8
1,241,873	+		Sama_1026	0.52	+1.3
1,241,874	-		Sama_1026	0.52	+0.2
1,241,874	-		Sama_1026	0.52	+0.1
1,241,874	-		Sama_1026	0.52	+0.9
1,241,874	-		Sama_1026	0.52	-0.6
1,241,894	+		Sama_1026	0.53	+1.6
1,241,929	-		Sama_1026	0.55	-1.8
1,242,104	-		Sama_1026	0.66	-0.1
1,242,159	+		Sama_1026	0.69	-0.6
1,242,159	+		Sama_1026	0.69	+0.2
1,242,160	-		Sama_1026	0.69	+0.1
1,242,160	-		Sama_1026	0.69	-1.3
1,242,190	+		Sama_1026	0.71	-0.4
1,242,232	+		Sama_1026	0.73	+1.3
1,242,232	+		Sama_1026	0.73	-2.8
1,242,232	+		Sama_1026	0.73	-0.3
1,242,232	+		Sama_1026	0.73	+0.7
1,242,232	+		Sama_1026	0.73	+0.7
1,242,232	+		Sama_1026	0.73	-0.3
1,242,232	+		Sama_1026	0.73	-0.7
1,242,232	+		Sama_1026	0.73	+0.1
1,242,232	+		Sama_1026	0.73	+1.0
1,242,232	+		Sama_1026	0.73	+0.3
1,242,232	+		Sama_1026	0.73	-0.6
1,242,233	-		Sama_1026	0.73	+0.5
1,242,233	-		Sama_1026	0.73	-0.2
1,242,233	-		Sama_1026	0.73	-2.6
1,242,233	-		Sama_1026	0.73	-1.9
1,242,233	-		Sama_1026	0.73	-0.4
1,242,233	-		Sama_1026	0.73	-1.4
1,242,233	-		Sama_1026	0.73	-2.4
1,242,233	-		Sama_1026	0.73	-1.5
1,242,233	-		Sama_1026	0.73	-1.6
1,242,233	-		Sama_1026	0.73	-2.0
1,242,233	-		Sama_1026	0.73	+0.3
1,242,236	+		Sama_1026	0.73	-0.3
1,242,236	+		Sama_1026	0.73	-0.2
1,242,236	+		Sama_1026	0.73	-0.7
1,242,237	-		Sama_1026	0.74	-0.8
1,242,237	-		Sama_1026	0.74	+2.3
1,242,267	+		Sama_1026	0.75	-0.6
1,242,267	+		Sama_1026	0.75	+1.0
1,242,362	-		Sama_1026	0.81	+1.0
1,242,404	+		Sama_1026	0.84	-0.7
1,242,405	-		Sama_1026	0.84	-1.7
1,242,575	+				-1.9
1,242,576	-				-1.5
1,242,576	-				+1.3
1,242,600	-				+0.3
1,242,653	+				+2.6
1,242,653	+				-1.0
1,242,697	+				+0.3
1,242,697	+				+0.4
1,242,698	-				-1.2
1,242,698	-				-0.0
1,242,698	-				-1.0
1,242,698	-				-0.2
1,242,709	+				-1.7
1,242,715	-				-1.3
1,242,727	+				-1.5
1,242,728	-				-0.8
1,242,729	+				+0.3
1,242,730	-				+1.0
1,242,749	+				-1.3
1,242,750	-				-1.0
1,242,860	-				+0.8
1,242,891	+		Sama_1027	0.11	-0.4
1,242,892	-		Sama_1027	0.11	+0.6
1,242,892	-		Sama_1027	0.11	-0.5
1,242,911	+		Sama_1027	0.13	-0.7
1,242,911	+		Sama_1027	0.13	-1.4
1,242,995	-		Sama_1027	0.22	+0.7
1,242,995	-		Sama_1027	0.22	+1.3
1,243,000	+		Sama_1027	0.22	-0.3
1,243,138	-		Sama_1027	0.37	+0.1
1,243,141	+		Sama_1027	0.37	-0.6
1,243,141	+		Sama_1027	0.37	-0.3
1,243,141	+		Sama_1027	0.37	-0.2
1,243,201	+		Sama_1027	0.44	-1.9
1,243,261	+		Sama_1027	0.50	+1.3
1,243,261	+		Sama_1027	0.50	-2.2
1,243,301	-		Sama_1027	0.54	+0.7
1,243,301	-		Sama_1027	0.54	-1.3
1,243,301	-		Sama_1027	0.54	-0.5
1,243,301	-		Sama_1027	0.54	-0.8
1,243,301	-		Sama_1027	0.54	+0.4
1,243,337	-		Sama_1027	0.58	-0.8
1,243,407	+		Sama_1027	0.65	-1.1
1,243,495	+		Sama_1027	0.75	-0.7
1,243,495	+		Sama_1027	0.75	-0.3
1,243,496	-		Sama_1027	0.75	-0.3
1,243,496	-		Sama_1027	0.75	-1.4
1,243,496	-		Sama_1027	0.75	-0.0
1,243,496	-		Sama_1027	0.75	-1.2
1,243,496	-		Sama_1027	0.75	-1.5
1,243,507	+		Sama_1027	0.76	-1.4
1,243,507	+		Sama_1027	0.76	-1.3
1,243,507	+		Sama_1027	0.76	-0.2
1,243,507	+		Sama_1027	0.76	-2.4
1,243,507	+		Sama_1027	0.76	-2.5
1,243,507	+		Sama_1027	0.76	-0.1
1,243,507	+		Sama_1027	0.76	-1.0
1,243,507	+		Sama_1027	0.76	-0.9
1,243,507	+		Sama_1027	0.76	+0.3
1,243,507	+		Sama_1027	0.76	+0.7
1,243,507	+		Sama_1027	0.76	+0.1
1,243,507	+		Sama_1027	0.76	+0.3
1,243,507	+		Sama_1027	0.76	-0.8
1,243,508	-		Sama_1027	0.76	-2.5
1,243,508	-		Sama_1027	0.76	-1.1
1,243,508	-		Sama_1027	0.76	-1.3
1,243,508	-		Sama_1027	0.76	+1.1
1,243,508	-		Sama_1027	0.76	-0.5
1,243,508	-		Sama_1027	0.76	-1.3
1,243,508	-		Sama_1027	0.76	-0.9
1,243,508	-		Sama_1027	0.76	+1.0
1,243,508	-		Sama_1027	0.76	+0.2
1,243,511	+		Sama_1027	0.76	-0.4
1,243,511	+		Sama_1027	0.76	-0.1
1,243,511	+		Sama_1027	0.76	-1.0
1,243,511	+		Sama_1027	0.76	-0.3
1,243,511	+		Sama_1027	0.76	-1.0
1,243,511	+		Sama_1027	0.76	+0.3
1,243,511	+		Sama_1027	0.76	-0.3
1,243,511	+		Sama_1027	0.76	-2.0
1,243,511	+		Sama_1027	0.76	-1.6
1,243,511	+		Sama_1027	0.76	+0.4
1,243,511	+		Sama_1027	0.76	-0.3
1,243,512	-		Sama_1027	0.76	+0.1
1,243,512	-		Sama_1027	0.76	+1.3
1,243,512	-		Sama_1027	0.76	-2.0
1,243,512	-		Sama_1027	0.76	-0.5
1,243,512	-		Sama_1027	0.76	+0.2
1,243,512	-		Sama_1027	0.76	-1.4
1,243,512	-		Sama_1027	0.76	-1.0
1,243,512	-		Sama_1027	0.76	-2.0
1,243,512	-		Sama_1027	0.76	-0.1
1,243,535	+		Sama_1027	0.79	-1.7
1,243,535	+		Sama_1027	0.79	-0.5
1,243,536	-		Sama_1027	0.79	-0.2
1,243,595	+		Sama_1027	0.85	-1.1
1,243,596	-		Sama_1027	0.85	+0.4
1,243,619	+		Sama_1027	0.88	+1.5
1,243,619	+		Sama_1027	0.88	-1.5
1,243,619	+		Sama_1027	0.88	+0.0
1,243,619	+		Sama_1027	0.88	+0.7
1,243,620	-		Sama_1027	0.88	-0.9
1,243,620	-		Sama_1027	0.88	-0.7
1,243,622	+		Sama_1027	0.88	-1.9
1,243,622	+		Sama_1027	0.88	-0.6
1,243,622	+		Sama_1027	0.88	+0.4
1,243,623	-		Sama_1027	0.88	-0.3
1,243,623	-		Sama_1027	0.88	-0.4
1,243,623	-		Sama_1027	0.88	-0.7
1,243,623	-		Sama_1027	0.88	-1.4
1,243,628	+		Sama_1027	0.89	+0.0
1,243,629	-		Sama_1027	0.89	-2.2
1,243,629	-		Sama_1027	0.89	+0.1
1,243,629	-		Sama_1027	0.89	-0.8
1,243,796	+				-0.5
1,243,796	+				-2.4
1,243,796	+				-0.9
1,243,797	-				-0.4
1,243,797	-				-1.2
1,243,797	-				+0.0
1,243,797	-				-0.6
1,243,797	-				+0.9
1,243,801	+				+0.3
1,243,801	+				+0.3
1,243,801	+				-0.8
1,243,801	+				+0.7
1,243,801	+				+0.3
1,243,801	+				-0.0
1,243,802	-				-1.5
1,243,802	-				+0.2
1,243,802	-				-1.5
1,243,842	+				+0.5
1,243,842	+				-1.3
1,243,843	-				-2.3
1,243,905	+				-2.3
1,244,069	+		Sama_1028	0.22	-1.7
1,244,069	+		Sama_1028	0.22	-3.3
1,244,070	-		Sama_1028	0.22	-1.5
1,244,079	+		Sama_1028	0.23	-2.0
1,244,088	+		Sama_1028	0.24	-2.7
1,244,089	-		Sama_1028	0.24	-2.5
1,244,121	+		Sama_1028	0.28	-2.2
1,244,122	-		Sama_1028	0.28	-2.2
1,244,122	-		Sama_1028	0.28	-2.8
1,244,122	-		Sama_1028	0.28	-0.3
1,244,122	-		Sama_1028	0.28	-3.0
1,244,122	-		Sama_1028	0.28	-1.0
1,244,122	-		Sama_1028	0.28	-1.9
1,244,159	+		Sama_1028	0.32	-2.5
1,244,177	+		Sama_1028	0.34	-3.0
1,244,177	+		Sama_1028	0.34	-0.7
1,244,178	-		Sama_1028	0.34	-1.7
1,244,178	-		Sama_1028	0.34	-2.7
1,244,195	+		Sama_1028	0.36	-2.4
1,244,227	-		Sama_1028	0.40	+1.3
1,244,246	+		Sama_1028	0.42	-1.3
1,244,247	-		Sama_1028	0.42	-0.7
1,244,247	-		Sama_1028	0.42	-1.0
1,244,247	-		Sama_1028	0.42	-2.3
1,244,266	+		Sama_1028	0.44	-0.3
1,244,290	+		Sama_1028	0.47	-2.6
1,244,290	+		Sama_1028	0.47	-2.6
1,244,290	+		Sama_1028	0.47	-2.4
1,244,290	+		Sama_1028	0.47	-2.7
1,244,290	+		Sama_1028	0.47	-1.9
1,244,290	+		Sama_1028	0.47	-2.9
1,244,290	+		Sama_1028	0.47	-0.7
1,244,290	+		Sama_1028	0.47	-0.8
1,244,291	-		Sama_1028	0.47	-2.7
1,244,291	-		Sama_1028	0.47	-1.7
1,244,291	-		Sama_1028	0.47	-0.7
1,244,291	-		Sama_1028	0.47	-2.6
1,244,291	-		Sama_1028	0.47	+0.3
1,244,291	-		Sama_1028	0.47	-2.6
1,244,291	-		Sama_1028	0.47	-3.1
1,244,291	-		Sama_1028	0.47	-1.5
1,244,291	-		Sama_1028	0.47	-1.9
1,244,291	-		Sama_1028	0.47	-1.0
1,244,291	-		Sama_1028	0.47	-1.3
1,244,291	-		Sama_1028	0.47	-2.6
1,244,291	-		Sama_1028	0.47	-2.8
1,244,294	+		Sama_1028	0.47	-1.9
1,244,294	+		Sama_1028	0.47	-2.3
1,244,294	+		Sama_1028	0.47	-1.7
1,244,294	+		Sama_1028	0.47	-1.3
1,244,295	-		Sama_1028	0.47	-1.7
1,244,295	-		Sama_1028	0.47	-2.7
1,244,449	+		Sama_1028	0.64	-2.6
1,244,460	+		Sama_1028	0.65	-1.3
1,244,460	+		Sama_1028	0.65	-0.7
1,244,460	+		Sama_1028	0.65	-1.7
1,244,460	+		Sama_1028	0.65	-1.9
1,244,460	+		Sama_1028	0.65	-2.4
1,244,460	+		Sama_1028	0.65	-2.2
1,244,460	+		Sama_1028	0.65	-2.5
1,244,461	-		Sama_1028	0.66	-1.9
1,244,461	-		Sama_1028	0.66	-3.4
1,244,461	-		Sama_1028	0.66	-0.7
1,244,461	-		Sama_1028	0.66	-0.5
1,244,462	+		Sama_1028	0.66	-1.3
1,244,462	+		Sama_1028	0.66	-2.5
1,244,463	-		Sama_1028	0.66	-1.7
1,244,499	+		Sama_1028	0.70	-4.2
1,244,499	+		Sama_1028	0.70	-2.7
1,244,500	-		Sama_1028	0.70	-3.4
1,244,500	-		Sama_1028	0.70	-1.3
1,244,500	-		Sama_1028	0.70	-0.7
1,244,500	-		Sama_1028	0.70	-2.5
1,244,500	-		Sama_1028	0.70	-0.0
1,244,500	-		Sama_1028	0.70	+0.1
1,244,500	-		Sama_1028	0.70	-1.7
1,244,500	-		Sama_1028	0.70	-1.0
1,244,502	+		Sama_1028	0.70	-2.4
1,244,502	+		Sama_1028	0.70	-1.0
1,244,503	-		Sama_1028	0.70	-2.7
1,244,503	-		Sama_1028	0.70	-2.0
1,244,503	-		Sama_1028	0.70	-2.6
1,244,503	-		Sama_1028	0.70	-2.6
1,244,546	+		Sama_1028	0.75	-1.1
1,244,546	+		Sama_1028	0.75	-1.9
1,244,546	+		Sama_1028	0.75	-2.0
1,244,575	+		Sama_1028	0.78	-3.2
1,244,575	+		Sama_1028	0.78	-2.2
1,244,575	+		Sama_1028	0.78	-1.7
1,244,575	+		Sama_1028	0.78	-3.2
1,244,575	+		Sama_1028	0.78	-2.0
1,244,575	+		Sama_1028	0.78	-3.5
1,244,576	-		Sama_1028	0.78	-2.6
1,244,576	-		Sama_1028	0.78	-1.5
1,244,576	-		Sama_1028	0.78	-2.5
1,244,576	-		Sama_1028	0.78	-1.9
1,244,576	-		Sama_1028	0.78	-4.3
1,244,580	+		Sama_1028	0.79	-1.5
1,244,580	+		Sama_1028	0.79	-2.0
1,244,580	+		Sama_1028	0.79	-2.5
1,244,580	+		Sama_1028	0.79	-1.3
1,244,580	+		Sama_1028	0.79	-3.0
1,244,581	-		Sama_1028	0.79	-2.3
1,244,581	-		Sama_1028	0.79	-1.9
1,244,581	-		Sama_1028	0.79	-1.3
1,244,710	+				-1.7
1,244,711	-				-2.0
1,244,711	-				-1.0
1,244,711	-				-2.8
1,244,711	-				-2.3
1,244,711	-				-0.4
1,244,729	+				-2.7
1,244,730	-				-3.1