Strain Fitness in Shewanella amazonensis SB2B around Sama_0955

Experiment: D,L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Lactate
1,154,989	+				+0.1
1,155,004	+				-0.7
1,155,004	+				-0.4
1,155,007	+				-0.4
1,155,007	+				+0.1
1,155,034	+				+0.2
1,155,034	+				+0.0
1,155,035	-				+0.3
1,155,035	-				-1.5
1,155,052	+				+0.1
1,155,112	+				-0.9
1,155,116	+				+0.3
1,155,116	+				-0.7
1,155,116	+				+0.1
1,155,116	+				-0.0
1,155,169	+				-1.5
1,155,984	+				-1.5
1,155,984	+				+0.3
1,155,985	-				+0.4
1,155,985	-				-0.2
1,155,986	+				+0.3
1,155,986	+				-0.3
1,155,987	-				+1.2
1,155,987	-				-0.2
1,155,987	-				+0.7
1,155,987	-				-1.5
1,155,996	+				-0.7
1,155,997	-				+0.4
1,155,997	-				-0.4
1,155,997	-				+0.6
1,155,997	-				+1.3
1,156,002	+				-0.6
1,156,002	+				-2.7
1,156,056	-				+1.7
1,156,186	+				+0.8
1,156,187	-				+0.6
1,156,204	+		Sama_0956	0.11	+0.4
1,156,211	-		Sama_0956	0.11	+0.7
1,156,211	-		Sama_0956	0.11	+1.1
1,156,216	+		Sama_0956	0.12	-0.4
1,156,217	-		Sama_0956	0.12	+0.4
1,156,226	+		Sama_0956	0.12	+0.7
1,156,228	+		Sama_0956	0.12	-1.3
1,156,228	+		Sama_0956	0.12	-0.2
1,156,228	+		Sama_0956	0.12	+1.7
1,156,228	+		Sama_0956	0.12	+0.0
1,156,228	+		Sama_0956	0.12	+0.5
1,156,228	+		Sama_0956	0.12	+1.2
1,156,228	+		Sama_0956	0.12	-0.4
1,156,228	+		Sama_0956	0.12	-1.2
1,156,229	-		Sama_0956	0.13	+0.9
1,156,229	-		Sama_0956	0.13	+0.7
1,156,229	-		Sama_0956	0.13	-0.0
1,156,229	-		Sama_0956	0.13	-0.3
1,156,229	-		Sama_0956	0.13	+0.1
1,156,229	-		Sama_0956	0.13	+1.3
1,156,273	+		Sama_0956	0.16	+2.9
1,156,274	-		Sama_0956	0.16	+0.3
1,156,321	+		Sama_0956	0.19	-1.2
1,156,322	-		Sama_0956	0.20	-0.1
1,156,322	-		Sama_0956	0.20	+1.4
1,156,322	-		Sama_0956	0.20	+0.8
1,156,376	+		Sama_0956	0.24	+2.2
1,156,376	+		Sama_0956	0.24	+1.0
1,156,376	+		Sama_0956	0.24	+0.2
1,156,376	+		Sama_0956	0.24	+0.8
1,156,379	+		Sama_0956	0.24	+2.6
1,156,379	+		Sama_0956	0.24	+0.6
1,156,380	-		Sama_0956	0.24	+1.4
1,156,417	+		Sama_0956	0.27	+1.6
1,156,417	+		Sama_0956	0.27	+0.4
1,156,417	+		Sama_0956	0.27	+0.3
1,156,504	-		Sama_0956	0.33	+1.3
1,156,504	-		Sama_0956	0.33	-0.6
1,156,532	+		Sama_0956	0.35	+0.8
1,156,533	-		Sama_0956	0.35	+1.9
1,156,533	-		Sama_0956	0.35	+0.5
1,156,533	-		Sama_0956	0.35	+0.7
1,156,533	-		Sama_0956	0.35	+0.6
1,156,533	-		Sama_0956	0.35	+0.4
1,156,533	-		Sama_0956	0.35	+1.9
1,156,534	+		Sama_0956	0.35	+1.1
1,156,534	+		Sama_0956	0.35	+1.3
1,156,619	+		Sama_0956	0.42	+0.5
1,156,619	+		Sama_0956	0.42	+1.9
1,156,619	+		Sama_0956	0.42	+0.3
1,156,619	+		Sama_0956	0.42	+0.1
1,156,619	+		Sama_0956	0.42	+1.3
1,156,619	+		Sama_0956	0.42	+1.6
1,156,620	-		Sama_0956	0.42	+0.5
1,156,620	-		Sama_0956	0.42	+1.7
1,156,626	+		Sama_0956	0.42	+1.9
1,156,626	+		Sama_0956	0.42	+1.1
1,156,662	+		Sama_0956	0.45	-0.4
1,156,671	+		Sama_0956	0.46	+1.3
1,156,705	+		Sama_0956	0.48	-0.9
1,156,705	+		Sama_0956	0.48	+1.1
1,156,705	+		Sama_0956	0.48	+1.0
1,156,706	-		Sama_0956	0.48	+1.8
1,156,706	-		Sama_0956	0.48	+1.3
1,156,733	-		Sama_0956	0.50	+2.3
1,156,733	-		Sama_0956	0.50	+0.6
1,156,830	+		Sama_0956	0.57	+0.7
1,156,830	+		Sama_0956	0.57	+0.4
1,156,830	+		Sama_0956	0.57	-0.3
1,156,830	+		Sama_0956	0.57	+2.0
1,156,830	+		Sama_0956	0.57	+1.2
1,156,830	+		Sama_0956	0.57	+0.7
1,156,830	+		Sama_0956	0.57	+0.8
1,156,830	+		Sama_0956	0.57	+0.7
1,156,830	+		Sama_0956	0.57	+0.7
1,156,830	+		Sama_0956	0.57	+0.7
1,156,830	+		Sama_0956	0.57	+1.2
1,156,831	-		Sama_0956	0.58	+1.0
1,156,831	-		Sama_0956	0.58	+0.7
1,156,831	-		Sama_0956	0.58	+0.7
1,156,831	-		Sama_0956	0.58	-0.5
1,156,831	-		Sama_0956	0.58	+1.9
1,156,831	-		Sama_0956	0.58	+0.7
1,156,831	-		Sama_0956	0.58	+1.3
1,156,831	-		Sama_0956	0.58	+0.5
1,156,831	-		Sama_0956	0.58	+1.1
1,156,831	-		Sama_0956	0.58	+1.7
1,156,831	-		Sama_0956	0.58	-0.3
1,156,831	-		Sama_0956	0.58	+2.0
1,156,850	+		Sama_0956	0.59	+0.4
1,156,850	+		Sama_0956	0.59	+0.8
1,156,851	-		Sama_0956	0.59	+1.0
1,156,851	-		Sama_0956	0.59	+0.3
1,156,851	-		Sama_0956	0.59	+1.1
1,156,854	+		Sama_0956	0.59	+1.3
1,156,854	+		Sama_0956	0.59	+1.1
1,156,854	+		Sama_0956	0.59	+1.3
1,156,854	+		Sama_0956	0.59	+0.3
1,156,855	-		Sama_0956	0.59	+0.3
1,156,855	-		Sama_0956	0.59	+2.3
1,156,855	-		Sama_0956	0.59	+0.6
1,156,855	-		Sama_0956	0.59	-1.3
1,156,855	-		Sama_0956	0.59	+1.2
1,156,887	+		Sama_0956	0.62	-0.0
1,156,887	+		Sama_0956	0.62	+0.7
1,156,887	+		Sama_0956	0.62	+1.8
1,156,923	+		Sama_0956	0.64	+2.6
1,156,923	+		Sama_0956	0.64	+0.7
1,156,923	+		Sama_0956	0.64	+1.0
1,156,924	-		Sama_0956	0.64	-2.3
1,156,954	+		Sama_0956	0.67	+0.1
1,156,954	+		Sama_0956	0.67	-2.3
1,156,954	+		Sama_0956	0.67	-0.3
1,156,954	+		Sama_0956	0.67	+0.1
1,156,954	+		Sama_0956	0.67	-1.0
1,156,954	+		Sama_0956	0.67	+2.0
1,156,955	-		Sama_0956	0.67	+0.2
1,156,955	-		Sama_0956	0.67	+0.8
1,156,955	-		Sama_0956	0.67	-0.7
1,156,956	+		Sama_0956	0.67	+1.9
1,156,957	-		Sama_0956	0.67	+0.3
1,156,972	+		Sama_0956	0.68	+0.2
1,156,973	-		Sama_0956	0.68	+2.5
1,156,989	-		Sama_0956	0.69	+2.3