Strain Fitness in Shewanella amazonensis SB2B around Sama_0352

Experiment: D,L-Lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmraY and Sama_0352 are separated by 2 nucleotidesSama_0352 and Sama_0353 overlap by 11 nucleotides Sama_0351: mraY - phospho-N-acetylmuramoyl-pentapeptide- transferase (RefSeq), at 420,757 to 421,839 mraY Sama_0352: Sama_0352 - UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq), at 421,842 to 423,173 _0352 Sama_0353: Sama_0353 - cell division protein FtsW (RefSeq), at 423,163 to 424,371 _0353 Position (kb) 421 422 423 424Strain fitness (log2 ratio) -1 0 1at 423.227 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate
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423,227 + -1.4

Or see this region's nucleotide sequence