Strain Fitness in Shewanella loihica PV-4 around Shew_3773

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
4,491,759	-		Shew_3771	0.55	-1.6
4,492,059	-				-1.2
4,492,155	-				+1.6
4,492,632	+		Shew_3772	0.87	+0.3
4,492,787	-				-0.2
4,492,818	+		Shew_3773	0.11	-0.3
4,492,840	-		Shew_3773	0.13	-2.4
4,492,957	+		Shew_3773	0.24	-0.3
4,493,092	+		Shew_3773	0.37	+0.0
4,493,223	-		Shew_3773	0.50	-0.7
4,493,408	-		Shew_3773	0.68	+0.6
4,493,442	-		Shew_3773	0.71	-0.8
4,493,590	+		Shew_3773	0.85	-0.8
4,493,649	+				+0.2
4,493,812	-		Shew_3774	0.14	+0.0
4,493,819	-		Shew_3774	0.17	+0.2
4,494,028	-		Shew_3774	0.80	-0.5
4,494,039	-		Shew_3774	0.84	+0.1
4,494,039	-		Shew_3774	0.84	-0.3
4,494,182	+		Shew_3775	0.21	+0.6
4,494,196	-		Shew_3775	0.24	+1.1
4,494,461	+				-0.4
4,494,506	+				-0.0
4,494,645	+				+0.7