Strain Fitness in Shewanella loihica PV-4 around Shew_3721

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
4,426,716	+		Shew_3720	0.42	-0.6
4,426,724	-		Shew_3720	0.42	-0.5
4,426,724	-		Shew_3720	0.42	-0.9
4,426,724	-		Shew_3720	0.42	-0.3
4,426,724	-		Shew_3720	0.42	+0.0
4,426,787	+		Shew_3720	0.47	-0.5
4,427,058	+		Shew_3720	0.67	-0.5
4,427,093	+		Shew_3720	0.70	-0.6
4,427,274	+		Shew_3720	0.83	-0.3
4,427,280	+		Shew_3720	0.84	-0.7
4,427,319	+		Shew_3720	0.87	+1.6
4,427,654	+				+0.1
4,427,790	+		Shew_3721	0.24	+0.5
4,427,919	-		Shew_3721	0.37	+0.4
4,427,972	+		Shew_3721	0.42	-0.9
4,427,972	+		Shew_3721	0.42	+0.2
4,428,267	+		Shew_3721	0.71	+0.6
4,428,326	-		Shew_3721	0.77	+2.6
4,428,497	-				+0.1
4,428,596	+				-0.9
4,428,812	+				+0.1
4,428,830	-				+0.1
4,429,068	-		Shew_3722	0.16	-0.1
4,429,095	-		Shew_3722	0.17	-1.1
4,429,373	-		Shew_3722	0.33	+0.2
4,429,483	+		Shew_3722	0.39	+0.4