Strain Fitness in Shewanella loihica PV-4 around Shew_3463

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
4,146,530	-				+0.3
4,146,596	+				+0.1
4,146,604	-				-0.4
4,146,620	+				-0.5
4,146,627	-				-0.1
4,146,694	-				-0.6
4,146,836	+		Shew_3463	0.22	+0.3
4,146,916	-		Shew_3463	0.33	+0.0
4,146,916	-		Shew_3463	0.33	+1.0
4,146,970	+		Shew_3463	0.41	+0.2
4,147,309	-		Shew_3463	0.89	+0.1
4,147,309	-		Shew_3463	0.89	+0.4
4,147,309	-		Shew_3463	0.89	-0.3
4,147,480	+				-0.6
4,147,488	-				-0.3
4,147,810	-		Shew_3464	0.38	+0.2
4,147,939	-		Shew_3464	0.49	+0.3
4,147,939	-		Shew_3464	0.49	+1.3
4,147,939	-		Shew_3464	0.49	+0.4
4,148,086	+		Shew_3464	0.62	-0.2
4,148,177	-		Shew_3464	0.70	+0.2
4,148,385	+		Shew_3464	0.89	+0.6