Strain Fitness in Shewanella loihica PV-4 around Shew_3399

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
4,045,800	-				+0.2
4,045,808	+				-0.9
4,045,964	-				+0.7
4,046,011	+				+0.3
4,046,332	+		Shew_3398	0.45	-0.7
4,046,600	+				-0.1
4,046,764	+				-0.2
4,046,764	+				+0.6
4,046,772	-				-0.8
4,046,772	-				+0.0
4,046,799	+				-1.0
4,047,206	-		Shew_3399	0.19	-0.0
4,047,255	-		Shew_3399	0.22	-0.2
4,047,585	+		Shew_3399	0.37	+0.4
4,047,690	+		Shew_3399	0.42	-2.1
4,047,859	-		Shew_3399	0.50	-2.0
4,047,967	+		Shew_3399	0.55	-0.6
4,048,005	+		Shew_3399	0.57	+0.0
4,048,017	+		Shew_3399	0.57	-0.1
4,048,056	-		Shew_3399	0.59	-0.1
4,048,318	-		Shew_3399	0.71	+0.2
4,048,858	-				+0.1
4,049,149	+				+0.2
4,049,379	-		Shew_3400	0.21	+0.3
4,049,449	+		Shew_3400	0.25	+1.2
4,049,680	+		Shew_3400	0.37	+0.2
4,049,796	+		Shew_3400	0.43	+0.8
4,049,854	-		Shew_3400	0.46	+0.1