Strain Fitness in Shewanella loihica PV-4 around Shew_3123

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
3,710,460	-		Shew_3122	0.58	-0.9
3,710,809	+				+0.5
3,710,809	+				+1.5
3,710,817	-				-0.5
3,710,893	-				-0.0
3,712,043	-		Shew_3123	0.47	-1.4
3,712,066	+		Shew_3123	0.48	-0.8
3,712,164	-		Shew_3123	0.52	-2.9
3,712,400	+		Shew_3123	0.62	-1.8
3,712,565	+		Shew_3123	0.69	-3.5
3,712,565	+		Shew_3123	0.69	+0.2
3,712,573	-		Shew_3123	0.69	-2.8
3,712,573	-		Shew_3123	0.69	-2.3
3,712,573	-		Shew_3123	0.69	-0.6
3,712,573	-		Shew_3123	0.69	-0.8
3,712,573	-		Shew_3123	0.69	-2.8
3,712,597	-		Shew_3123	0.70	-1.9
3,712,995	-		Shew_3123	0.87	-1.6
3,712,997	+		Shew_3123	0.87	-2.7
3,713,404	+				-2.7
3,713,702	-		Shew_3124	0.15	-0.4
3,713,733	+		Shew_3124	0.16	-0.8