Strain Fitness in Shewanella loihica PV-4 around Shew_3006

Experiment: Vancomycin 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.0625 mg/ml
3,568,784	+		Shew_3005	0.29	-0.3
3,568,784	+		Shew_3005	0.29	+0.0
3,568,805	+		Shew_3005	0.30	-0.6
3,569,098	-		Shew_3005	0.51	-0.4
3,569,225	+		Shew_3005	0.60	+1.2
3,569,225	+		Shew_3005	0.60	-0.4
3,569,579	-		Shew_3005	0.86	+0.3
3,569,803	-				+0.8
3,569,958	-		Shew_3006	0.32	+0.2
3,570,146	-		Shew_3006	0.65	+0.0
3,570,292	+				-0.9
3,570,300	-				-0.2
3,570,389	-				-0.2
3,570,407	-				+0.4
3,570,614	+				+2.2
3,570,651	+				+0.5
3,570,659	-				-0.4
3,570,659	-				+0.5
3,570,659	-				+0.1
3,570,694	+				+1.2
3,570,802	+		Shew_3007	0.19	+0.4
3,570,810	-		Shew_3007	0.20	+0.4
3,570,862	+		Shew_3007	0.26	+0.1
3,570,947	-		Shew_3007	0.35	-0.1
3,571,345	+		Shew_3007	0.80	-0.6